Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.42■□□□□ 0.54
RCL1Q9Y2P8 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.42■□□□□ 0.54
RCL1Q9Y2P8 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.42■□□□□ 0.54
RCL1Q9Y2P8 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
RCL1Q9Y2P8 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
RCL1Q9Y2P8 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RCL1Q9Y2P8 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RCL1Q9Y2P8 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RCL1Q9Y2P8 RP9P-202ENST00000450133 1212 ntBASIC18.41■□□□□ 0.54
RCL1Q9Y2P8 ZNRF2P2-203ENST00000454624 420 ntBASIC18.41■□□□□ 0.54
RCL1Q9Y2P8 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RCL1Q9Y2P8 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RCL1Q9Y2P8 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RCL1Q9Y2P8 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.41■□□□□ 0.54
RCL1Q9Y2P8 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
RCL1Q9Y2P8 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.4■□□□□ 0.54
RCL1Q9Y2P8 AL161729.1-201ENST00000604104 1402 ntBASIC18.4■□□□□ 0.54
RCL1Q9Y2P8 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
RCL1Q9Y2P8 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.4■□□□□ 0.54
RCL1Q9Y2P8 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RCL1Q9Y2P8 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RCL1Q9Y2P8 AC093536.1-201ENST00000569153 554 ntBASIC18.4■□□□□ 0.54
RCL1Q9Y2P8 AC092296.2-201ENST00000589470 999 ntBASIC18.4■□□□□ 0.54
RCL1Q9Y2P8 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RCL1Q9Y2P8 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
RCL1Q9Y2P8 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
RCL1Q9Y2P8 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RCL1Q9Y2P8 REST-210ENST00000638187 1334 ntTSL 5 BASIC18.4■□□□□ 0.54
RCL1Q9Y2P8 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
RCL1Q9Y2P8 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
RCL1Q9Y2P8 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.39■□□□□ 0.54
RCL1Q9Y2P8 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.39■□□□□ 0.54
RCL1Q9Y2P8 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RCL1Q9Y2P8 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RCL1Q9Y2P8 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC18.39■□□□□ 0.53
RCL1Q9Y2P8 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RCL1Q9Y2P8 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RCL1Q9Y2P8 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
RCL1Q9Y2P8 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RCL1Q9Y2P8 METRNL-202ENST00000570778 967 ntTSL 5 BASIC18.39■□□□□ 0.53
RCL1Q9Y2P8 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC18.39■□□□□ 0.53
RCL1Q9Y2P8 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RCL1Q9Y2P8 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RCL1Q9Y2P8 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RCL1Q9Y2P8 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
RCL1Q9Y2P8 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RCL1Q9Y2P8 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
RCL1Q9Y2P8 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RCL1Q9Y2P8 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RCL1Q9Y2P8 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RCL1Q9Y2P8 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RCL1Q9Y2P8 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RCL1Q9Y2P8 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RCL1Q9Y2P8 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.38■□□□□ 0.53
RCL1Q9Y2P8 KRT18P10-201ENST00000388836 1287 ntBASIC18.38■□□□□ 0.53
RCL1Q9Y2P8 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RCL1Q9Y2P8 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RCL1Q9Y2P8 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RCL1Q9Y2P8 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RCL1Q9Y2P8 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RCL1Q9Y2P8 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RCL1Q9Y2P8 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RCL1Q9Y2P8 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
RCL1Q9Y2P8 AL137060.1-201ENST00000618151 2648 ntBASIC18.37■□□□□ 0.53
RCL1Q9Y2P8 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.37■□□□□ 0.53
RCL1Q9Y2P8 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RCL1Q9Y2P8 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.37■□□□□ 0.53
RCL1Q9Y2P8 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.37■□□□□ 0.53
RCL1Q9Y2P8 ESRRAP2-201ENST00000418437 1549 ntBASIC18.37■□□□□ 0.53
RCL1Q9Y2P8 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC18.37■□□□□ 0.53
RCL1Q9Y2P8 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.37■□□□□ 0.53
RCL1Q9Y2P8 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
RCL1Q9Y2P8 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RCL1Q9Y2P8 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RCL1Q9Y2P8 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.37■□□□□ 0.53
RCL1Q9Y2P8 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.37■□□□□ 0.53
RCL1Q9Y2P8 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RCL1Q9Y2P8 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RCL1Q9Y2P8 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
RCL1Q9Y2P8 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RCL1Q9Y2P8 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.36■□□□□ 0.53
RCL1Q9Y2P8 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RCL1Q9Y2P8 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RCL1Q9Y2P8 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
RCL1Q9Y2P8 MLEC-202ENST00000412616 841 ntTSL 3 BASIC18.36■□□□□ 0.53
RCL1Q9Y2P8 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RCL1Q9Y2P8 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.36■□□□□ 0.53
RCL1Q9Y2P8 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC18.36■□□□□ 0.53
RCL1Q9Y2P8 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.36■□□□□ 0.53
RCL1Q9Y2P8 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC18.36■□□□□ 0.53
RCL1Q9Y2P8 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RCL1Q9Y2P8 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.36■□□□□ 0.53
RCL1Q9Y2P8 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RCL1Q9Y2P8 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
RCL1Q9Y2P8 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
RCL1Q9Y2P8 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RCL1Q9Y2P8 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RCL1Q9Y2P8 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RCL1Q9Y2P8 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RCL1Q9Y2P8 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms