Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
COMMD3Q9UBI1 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COMMD3Q9UBI1 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC19.83■□□□□ 0.77
COMMD3Q9UBI1 HGH1-207ENST00000628266 258 ntTSL 5 BASIC19.83■□□□□ 0.77
COMMD3Q9UBI1 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.83■□□□□ 0.77
COMMD3Q9UBI1 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
COMMD3Q9UBI1 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
COMMD3Q9UBI1 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COMMD3Q9UBI1 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COMMD3Q9UBI1 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COMMD3Q9UBI1 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COMMD3Q9UBI1 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COMMD3Q9UBI1 MIR3960-201ENST00000583311 91 ntBASIC19.82■□□□□ 0.76
COMMD3Q9UBI1 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COMMD3Q9UBI1 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.82■□□□□ 0.76
COMMD3Q9UBI1 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COMMD3Q9UBI1 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COMMD3Q9UBI1 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.81■□□□□ 0.76
COMMD3Q9UBI1 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COMMD3Q9UBI1 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COMMD3Q9UBI1 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COMMD3Q9UBI1 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
COMMD3Q9UBI1 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COMMD3Q9UBI1 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC19.81■□□□□ 0.76
COMMD3Q9UBI1 DUX4L11-201ENST00000611504 1267 ntBASIC19.81■□□□□ 0.76
COMMD3Q9UBI1 DUX4L12-201ENST00000614593 1267 ntBASIC19.81■□□□□ 0.76
COMMD3Q9UBI1 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
COMMD3Q9UBI1 DUX4L14-201ENST00000621227 1267 ntBASIC19.81■□□□□ 0.76
COMMD3Q9UBI1 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.81■□□□□ 0.76
COMMD3Q9UBI1 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COMMD3Q9UBI1 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COMMD3Q9UBI1 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COMMD3Q9UBI1 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
COMMD3Q9UBI1 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
COMMD3Q9UBI1 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.81■□□□□ 0.76
COMMD3Q9UBI1 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.81■□□□□ 0.76
COMMD3Q9UBI1 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
COMMD3Q9UBI1 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.8■□□□□ 0.76
COMMD3Q9UBI1 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.8■□□□□ 0.76
COMMD3Q9UBI1 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
COMMD3Q9UBI1 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COMMD3Q9UBI1 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COMMD3Q9UBI1 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COMMD3Q9UBI1 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COMMD3Q9UBI1 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COMMD3Q9UBI1 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
COMMD3Q9UBI1 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
COMMD3Q9UBI1 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.79■□□□□ 0.76
COMMD3Q9UBI1 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.79■□□□□ 0.76
COMMD3Q9UBI1 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COMMD3Q9UBI1 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.79■□□□□ 0.76
COMMD3Q9UBI1 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.79■□□□□ 0.76
COMMD3Q9UBI1 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COMMD3Q9UBI1 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
COMMD3Q9UBI1 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
COMMD3Q9UBI1 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COMMD3Q9UBI1 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC19.78■□□□□ 0.76
COMMD3Q9UBI1 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COMMD3Q9UBI1 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
COMMD3Q9UBI1 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
COMMD3Q9UBI1 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
COMMD3Q9UBI1 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
COMMD3Q9UBI1 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.77■□□□□ 0.76
COMMD3Q9UBI1 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.76
COMMD3Q9UBI1 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.77■□□□□ 0.76
COMMD3Q9UBI1 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
COMMD3Q9UBI1 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
COMMD3Q9UBI1 AC025884.2-201ENST00000553429 711 ntBASIC19.77■□□□□ 0.76
COMMD3Q9UBI1 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.77■□□□□ 0.76
COMMD3Q9UBI1 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COMMD3Q9UBI1 ESRRAP2-201ENST00000418437 1549 ntBASIC19.76■□□□□ 0.75
COMMD3Q9UBI1 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COMMD3Q9UBI1 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.76■□□□□ 0.75
COMMD3Q9UBI1 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.76■□□□□ 0.75
COMMD3Q9UBI1 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COMMD3Q9UBI1 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COMMD3Q9UBI1 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.76■□□□□ 0.75
COMMD3Q9UBI1 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COMMD3Q9UBI1 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
COMMD3Q9UBI1 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.76■□□□□ 0.75
COMMD3Q9UBI1 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
COMMD3Q9UBI1 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
COMMD3Q9UBI1 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.75■□□□□ 0.75
COMMD3Q9UBI1 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.75■□□□□ 0.75
COMMD3Q9UBI1 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COMMD3Q9UBI1 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.75■□□□□ 0.75
COMMD3Q9UBI1 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
COMMD3Q9UBI1 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC19.75■□□□□ 0.75
COMMD3Q9UBI1 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COMMD3Q9UBI1 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.75■□□□□ 0.75
COMMD3Q9UBI1 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COMMD3Q9UBI1 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
COMMD3Q9UBI1 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
COMMD3Q9UBI1 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COMMD3Q9UBI1 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.74■□□□□ 0.75
COMMD3Q9UBI1 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COMMD3Q9UBI1 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC19.74■□□□□ 0.75
COMMD3Q9UBI1 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COMMD3Q9UBI1 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COMMD3Q9UBI1 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms