Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 AL356740.2-201ENST00000601559 647 ntBASIC21.06■□□□□ 0.96
CNIH4Q9P003 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.06■□□□□ 0.96
CNIH4Q9P003 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNIH4Q9P003 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CNIH4Q9P003 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CNIH4Q9P003 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.05■□□□□ 0.96
CNIH4Q9P003 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
CNIH4Q9P003 MIR3621-201ENST00000580529 85 ntBASIC21.05■□□□□ 0.96
CNIH4Q9P003 AL117332.1-201ENST00000622628 974 ntBASIC21.05■□□□□ 0.96
CNIH4Q9P003 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CNIH4Q9P003 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CNIH4Q9P003 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CNIH4Q9P003 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CNIH4Q9P003 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CNIH4Q9P003 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
CNIH4Q9P003 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CNIH4Q9P003 C9orf163-202ENST00000624034 2573 ntBASIC21.04■□□□□ 0.96
CNIH4Q9P003 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CNIH4Q9P003 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CNIH4Q9P003 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CNIH4Q9P003 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.04■□□□□ 0.96
CNIH4Q9P003 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CNIH4Q9P003 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.04■□□□□ 0.96
CNIH4Q9P003 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
CNIH4Q9P003 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.04■□□□□ 0.96
CNIH4Q9P003 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CNIH4Q9P003 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CNIH4Q9P003 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CNIH4Q9P003 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CNIH4Q9P003 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CNIH4Q9P003 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CNIH4Q9P003 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CNIH4Q9P003 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CNIH4Q9P003 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.03■□□□□ 0.96
CNIH4Q9P003 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.03■□□□□ 0.96
CNIH4Q9P003 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.03■□□□□ 0.96
CNIH4Q9P003 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.03■□□□□ 0.96
CNIH4Q9P003 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.03■□□□□ 0.96
CNIH4Q9P003 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CNIH4Q9P003 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CNIH4Q9P003 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CNIH4Q9P003 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CNIH4Q9P003 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CNIH4Q9P003 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
CNIH4Q9P003 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CNIH4Q9P003 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.02■□□□□ 0.96
CNIH4Q9P003 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CNIH4Q9P003 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CNIH4Q9P003 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CNIH4Q9P003 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.02■□□□□ 0.96
CNIH4Q9P003 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.02■□□□□ 0.96
CNIH4Q9P003 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.02■□□□□ 0.96
CNIH4Q9P003 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CNIH4Q9P003 AC005703.6-201ENST00000623265 1329 ntBASIC21.02■□□□□ 0.95
CNIH4Q9P003 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
CNIH4Q9P003 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNIH4Q9P003 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNIH4Q9P003 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNIH4Q9P003 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CNIH4Q9P003 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.01■□□□□ 0.95
CNIH4Q9P003 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.01■□□□□ 0.95
CNIH4Q9P003 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNIH4Q9P003 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CNIH4Q9P003 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNIH4Q9P003 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.01■□□□□ 0.95
CNIH4Q9P003 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CNIH4Q9P003 REST-206ENST00000612429 1376 ntTSL 5 BASIC21■□□□□ 0.95
CNIH4Q9P003 REST-207ENST00000616975 1370 ntTSL 5 BASIC21■□□□□ 0.95
CNIH4Q9P003 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21■□□□□ 0.95
CNIH4Q9P003 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21■□□□□ 0.95
CNIH4Q9P003 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CNIH4Q9P003 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CNIH4Q9P003 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CNIH4Q9P003 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21■□□□□ 0.95
CNIH4Q9P003 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21■□□□□ 0.95
CNIH4Q9P003 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CNIH4Q9P003 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21■□□□□ 0.95
CNIH4Q9P003 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CNIH4Q9P003 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CNIH4Q9P003 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CNIH4Q9P003 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CNIH4Q9P003 AC008406.3-201ENST00000620001 1374 ntBASIC20.99■□□□□ 0.95
CNIH4Q9P003 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CNIH4Q9P003 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CNIH4Q9P003 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.99■□□□□ 0.95
CNIH4Q9P003 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.99■□□□□ 0.95
CNIH4Q9P003 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CNIH4Q9P003 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CNIH4Q9P003 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.98■□□□□ 0.95
CNIH4Q9P003 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CNIH4Q9P003 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CNIH4Q9P003 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.98■□□□□ 0.95
CNIH4Q9P003 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CNIH4Q9P003 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.98■□□□□ 0.95
CNIH4Q9P003 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.98■□□□□ 0.95
CNIH4Q9P003 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CNIH4Q9P003 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
CNIH4Q9P003 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
CNIH4Q9P003 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CNIH4Q9P003 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms