Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
NDE1Q9NXR1 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.8■■□□□ 1.08
NDE1Q9NXR1 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.8■■□□□ 1.08
NDE1Q9NXR1 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.8■■□□□ 1.08
NDE1Q9NXR1 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.8■■□□□ 1.08
NDE1Q9NXR1 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NDE1Q9NXR1 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NDE1Q9NXR1 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
NDE1Q9NXR1 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.8■■□□□ 1.08
NDE1Q9NXR1 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NDE1Q9NXR1 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
NDE1Q9NXR1 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NDE1Q9NXR1 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NDE1Q9NXR1 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
NDE1Q9NXR1 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.79■■□□□ 1.08
NDE1Q9NXR1 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
NDE1Q9NXR1 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC21.79■■□□□ 1.08
NDE1Q9NXR1 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
NDE1Q9NXR1 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NDE1Q9NXR1 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NDE1Q9NXR1 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.78■■□□□ 1.08
NDE1Q9NXR1 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NDE1Q9NXR1 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NDE1Q9NXR1 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NDE1Q9NXR1 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NDE1Q9NXR1 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.78■■□□□ 1.08
NDE1Q9NXR1 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NDE1Q9NXR1 AC060814.1-201ENST00000554326 538 ntBASIC21.78■■□□□ 1.08
NDE1Q9NXR1 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NDE1Q9NXR1 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NDE1Q9NXR1 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NDE1Q9NXR1 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NDE1Q9NXR1 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
NDE1Q9NXR1 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NDE1Q9NXR1 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NDE1Q9NXR1 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NDE1Q9NXR1 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
NDE1Q9NXR1 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.77■■□□□ 1.08
NDE1Q9NXR1 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NDE1Q9NXR1 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
NDE1Q9NXR1 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
NDE1Q9NXR1 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
NDE1Q9NXR1 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
NDE1Q9NXR1 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NDE1Q9NXR1 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.77■■□□□ 1.08
NDE1Q9NXR1 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
NDE1Q9NXR1 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.07
NDE1Q9NXR1 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.07
NDE1Q9NXR1 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.76■■□□□ 1.07
NDE1Q9NXR1 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.76■■□□□ 1.07
NDE1Q9NXR1 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.76■■□□□ 1.07
NDE1Q9NXR1 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.76■■□□□ 1.07
NDE1Q9NXR1 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.76■■□□□ 1.07
NDE1Q9NXR1 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NDE1Q9NXR1 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NDE1Q9NXR1 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
NDE1Q9NXR1 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NDE1Q9NXR1 MLEC-202ENST00000412616 841 ntTSL 3 BASIC21.76■■□□□ 1.07
NDE1Q9NXR1 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NDE1Q9NXR1 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.76■■□□□ 1.07
NDE1Q9NXR1 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NDE1Q9NXR1 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
NDE1Q9NXR1 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.76■■□□□ 1.07
NDE1Q9NXR1 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NDE1Q9NXR1 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NDE1Q9NXR1 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NDE1Q9NXR1 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
NDE1Q9NXR1 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.75■■□□□ 1.07
NDE1Q9NXR1 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NDE1Q9NXR1 AC093536.1-201ENST00000569153 554 ntBASIC21.75■■□□□ 1.07
NDE1Q9NXR1 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
NDE1Q9NXR1 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NDE1Q9NXR1 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NDE1Q9NXR1 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.75■■□□□ 1.07
NDE1Q9NXR1 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NDE1Q9NXR1 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.74■■□□□ 1.07
NDE1Q9NXR1 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
NDE1Q9NXR1 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.74■■□□□ 1.07
NDE1Q9NXR1 ZNRF2P2-203ENST00000454624 420 ntBASIC21.74■■□□□ 1.07
NDE1Q9NXR1 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.74■■□□□ 1.07
NDE1Q9NXR1 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
NDE1Q9NXR1 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.74■■□□□ 1.07
NDE1Q9NXR1 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.73■■□□□ 1.07
NDE1Q9NXR1 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NDE1Q9NXR1 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NDE1Q9NXR1 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NDE1Q9NXR1 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.73■■□□□ 1.07
NDE1Q9NXR1 AC092296.2-201ENST00000589470 999 ntBASIC21.73■■□□□ 1.07
NDE1Q9NXR1 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NDE1Q9NXR1 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.73■■□□□ 1.07
NDE1Q9NXR1 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NDE1Q9NXR1 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NDE1Q9NXR1 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NDE1Q9NXR1 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NDE1Q9NXR1 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NDE1Q9NXR1 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.72■■□□□ 1.07
NDE1Q9NXR1 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NDE1Q9NXR1 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.72■■□□□ 1.07
NDE1Q9NXR1 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21.72■■□□□ 1.07
NDE1Q9NXR1 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms