Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HPF1Q9NWY4 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HPF1Q9NWY4 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HPF1Q9NWY4 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HPF1Q9NWY4 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HPF1Q9NWY4 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HPF1Q9NWY4 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
HPF1Q9NWY4 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
HPF1Q9NWY4 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HPF1Q9NWY4 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HPF1Q9NWY4 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HPF1Q9NWY4 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HPF1Q9NWY4 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HPF1Q9NWY4 AC110285.6-201ENST00000617652 491 ntBASIC20.85■□□□□ 0.93
HPF1Q9NWY4 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.85■□□□□ 0.93
HPF1Q9NWY4 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HPF1Q9NWY4 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HPF1Q9NWY4 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.85■□□□□ 0.93
HPF1Q9NWY4 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HPF1Q9NWY4 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
HPF1Q9NWY4 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HPF1Q9NWY4 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.84■□□□□ 0.93
HPF1Q9NWY4 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HPF1Q9NWY4 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
HPF1Q9NWY4 AC092171.4-201ENST00000609130 632 ntBASIC20.84■□□□□ 0.93
HPF1Q9NWY4 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.84■□□□□ 0.93
HPF1Q9NWY4 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.84■□□□□ 0.93
HPF1Q9NWY4 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.84■□□□□ 0.93
HPF1Q9NWY4 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
HPF1Q9NWY4 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.84■□□□□ 0.93
HPF1Q9NWY4 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
HPF1Q9NWY4 AC141586.4-201ENST00000624558 1573 ntBASIC20.84■□□□□ 0.93
HPF1Q9NWY4 AC093323.1-202ENST00000635031 2045 ntBASIC20.83■□□□□ 0.93
HPF1Q9NWY4 LINC01124-201ENST00000409786 2117 ntBASIC20.83■□□□□ 0.93
HPF1Q9NWY4 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
HPF1Q9NWY4 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
HPF1Q9NWY4 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HPF1Q9NWY4 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HPF1Q9NWY4 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.83■□□□□ 0.92
HPF1Q9NWY4 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
HPF1Q9NWY4 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.83■□□□□ 0.92
HPF1Q9NWY4 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
HPF1Q9NWY4 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HPF1Q9NWY4 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
HPF1Q9NWY4 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
HPF1Q9NWY4 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.83■□□□□ 0.92
HPF1Q9NWY4 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HPF1Q9NWY4 AC019069.1-201ENST00000610008 1333 ntBASIC20.82■□□□□ 0.92
HPF1Q9NWY4 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.82■□□□□ 0.92
HPF1Q9NWY4 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HPF1Q9NWY4 DUX4L19-201ENST00000557448 1267 ntBASIC20.82■□□□□ 0.92
HPF1Q9NWY4 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
HPF1Q9NWY4 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
HPF1Q9NWY4 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HPF1Q9NWY4 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HPF1Q9NWY4 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
HPF1Q9NWY4 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HPF1Q9NWY4 UNC93B3-201ENST00000308076 687 ntBASIC20.81■□□□□ 0.92
HPF1Q9NWY4 MIR638-201ENST00000385237 100 ntBASIC20.81■□□□□ 0.92
HPF1Q9NWY4 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HPF1Q9NWY4 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
HPF1Q9NWY4 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HPF1Q9NWY4 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HPF1Q9NWY4 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.81■□□□□ 0.92
HPF1Q9NWY4 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HPF1Q9NWY4 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
HPF1Q9NWY4 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HPF1Q9NWY4 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.8■□□□□ 0.92
HPF1Q9NWY4 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HPF1Q9NWY4 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.8■□□□□ 0.92
HPF1Q9NWY4 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
HPF1Q9NWY4 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.8■□□□□ 0.92
HPF1Q9NWY4 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HPF1Q9NWY4 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.8■□□□□ 0.92
HPF1Q9NWY4 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.8■□□□□ 0.92
HPF1Q9NWY4 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
HPF1Q9NWY4 LINC00543-201ENST00000567234 1845 ntBASIC20.8■□□□□ 0.92
HPF1Q9NWY4 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HPF1Q9NWY4 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.8■□□□□ 0.92
HPF1Q9NWY4 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
HPF1Q9NWY4 C17orf82-201ENST00000623772 1530 ntBASIC20.79■□□□□ 0.92
HPF1Q9NWY4 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.79■□□□□ 0.92
HPF1Q9NWY4 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
HPF1Q9NWY4 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HPF1Q9NWY4 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HPF1Q9NWY4 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HPF1Q9NWY4 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HPF1Q9NWY4 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HPF1Q9NWY4 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
HPF1Q9NWY4 AL139125.2-201ENST00000623134 1869 ntBASIC20.79■□□□□ 0.92
HPF1Q9NWY4 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HPF1Q9NWY4 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HPF1Q9NWY4 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.78■□□□□ 0.92
HPF1Q9NWY4 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HPF1Q9NWY4 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HPF1Q9NWY4 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
HPF1Q9NWY4 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HPF1Q9NWY4 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HPF1Q9NWY4 SYT6-210ENST00000641643 1587 ntBASIC20.78■□□□□ 0.92
HPF1Q9NWY4 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms