Protein–RNA interactions for Protein: Q9NUL5

RYDEN, Repressor of yield of DENV protein, humanhuman

Known RBP Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RYDENQ9NUL5 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.68■□□□□ 0.9
RYDENQ9NUL5 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.68■□□□□ 0.9
RYDENQ9NUL5 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
RYDENQ9NUL5 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RYDENQ9NUL5 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RYDENQ9NUL5 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RYDENQ9NUL5 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RYDENQ9NUL5 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.67■□□□□ 0.9
RYDENQ9NUL5 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
RYDENQ9NUL5 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RYDENQ9NUL5 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.67■□□□□ 0.9
RYDENQ9NUL5 AC106739.1-201ENST00000617035 715 ntBASIC20.67■□□□□ 0.9
RYDENQ9NUL5 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.67■□□□□ 0.9
RYDENQ9NUL5 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RYDENQ9NUL5 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RYDENQ9NUL5 AC144652.1-201ENST00000609974 1624 ntBASIC20.67■□□□□ 0.9
RYDENQ9NUL5 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RYDENQ9NUL5 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RYDENQ9NUL5 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
RYDENQ9NUL5 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.66■□□□□ 0.9
RYDENQ9NUL5 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.66■□□□□ 0.9
RYDENQ9NUL5 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
RYDENQ9NUL5 AC009086.3-201ENST00000623486 1008 ntBASIC20.66■□□□□ 0.9
RYDENQ9NUL5 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.66■□□□□ 0.9
RYDENQ9NUL5 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
RYDENQ9NUL5 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RYDENQ9NUL5 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RYDENQ9NUL5 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RYDENQ9NUL5 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.65■□□□□ 0.9
RYDENQ9NUL5 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RYDENQ9NUL5 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RYDENQ9NUL5 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RYDENQ9NUL5 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RYDENQ9NUL5 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RYDENQ9NUL5 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RYDENQ9NUL5 EDA-201ENST00000338901 1233 ntBASIC20.65■□□□□ 0.9
RYDENQ9NUL5 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.65■□□□□ 0.9
RYDENQ9NUL5 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.65■□□□□ 0.9
RYDENQ9NUL5 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RYDENQ9NUL5 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RYDENQ9NUL5 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.65■□□□□ 0.9
RYDENQ9NUL5 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RYDENQ9NUL5 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RYDENQ9NUL5 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RYDENQ9NUL5 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
RYDENQ9NUL5 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
RYDENQ9NUL5 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.64■□□□□ 0.89
RYDENQ9NUL5 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RYDENQ9NUL5 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.64■□□□□ 0.89
RYDENQ9NUL5 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RYDENQ9NUL5 AL499627.2-201ENST00000606283 725 ntBASIC20.64■□□□□ 0.89
RYDENQ9NUL5 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.64■□□□□ 0.89
RYDENQ9NUL5 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RYDENQ9NUL5 LINC01529-204ENST00000636474 1715 ntBASIC20.64■□□□□ 0.89
RYDENQ9NUL5 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RYDENQ9NUL5 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RYDENQ9NUL5 AC099791.2-201ENST00000605725 427 ntBASIC20.63■□□□□ 0.89
RYDENQ9NUL5 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RYDENQ9NUL5 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
RYDENQ9NUL5 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RYDENQ9NUL5 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RYDENQ9NUL5 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RYDENQ9NUL5 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.62■□□□□ 0.89
RYDENQ9NUL5 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RYDENQ9NUL5 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RYDENQ9NUL5 AC135279.3-201ENST00000610945 1311 ntBASIC20.62■□□□□ 0.89
RYDENQ9NUL5 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RYDENQ9NUL5 UNC93B3-201ENST00000308076 687 ntBASIC20.62■□□□□ 0.89
RYDENQ9NUL5 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.62■□□□□ 0.89
RYDENQ9NUL5 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RYDENQ9NUL5 AC136469.2-201ENST00000623944 1028 ntBASIC20.62■□□□□ 0.89
RYDENQ9NUL5 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
RYDENQ9NUL5 AC135731.1-201ENST00000569415 2548 ntBASIC20.62■□□□□ 0.89
RYDENQ9NUL5 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.61■□□□□ 0.89
RYDENQ9NUL5 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RYDENQ9NUL5 AC096631.2-201ENST00000436136 790 ntBASIC20.61■□□□□ 0.89
RYDENQ9NUL5 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.61■□□□□ 0.89
RYDENQ9NUL5 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RYDENQ9NUL5 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.61■□□□□ 0.89
RYDENQ9NUL5 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RYDENQ9NUL5 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RYDENQ9NUL5 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RYDENQ9NUL5 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RYDENQ9NUL5 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
RYDENQ9NUL5 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RYDENQ9NUL5 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RYDENQ9NUL5 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RYDENQ9NUL5 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.6■□□□□ 0.89
RYDENQ9NUL5 AL136162.1-201ENST00000607711 1078 ntBASIC20.6■□□□□ 0.89
RYDENQ9NUL5 AC110285.6-201ENST00000617652 491 ntBASIC20.6■□□□□ 0.89
RYDENQ9NUL5 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RYDENQ9NUL5 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RYDENQ9NUL5 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RYDENQ9NUL5 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RYDENQ9NUL5 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RYDENQ9NUL5 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RYDENQ9NUL5 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.59■□□□□ 0.89
RYDENQ9NUL5 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RYDENQ9NUL5 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
RYDENQ9NUL5 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms