Protein–RNA interactions for Protein: Q9NPL8

TIMMDC1, Complex I assembly factor TIMMDC1, mitochondrial, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMMDC1Q9NPL8 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.55■■□□□ 1.04
TIMMDC1Q9NPL8 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TIMMDC1Q9NPL8 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.55■■□□□ 1.04
TIMMDC1Q9NPL8 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TIMMDC1Q9NPL8 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TIMMDC1Q9NPL8 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TIMMDC1Q9NPL8 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
TIMMDC1Q9NPL8 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
TIMMDC1Q9NPL8 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TIMMDC1Q9NPL8 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TIMMDC1Q9NPL8 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TIMMDC1Q9NPL8 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
TIMMDC1Q9NPL8 AC141586.4-201ENST00000624558 1573 ntBASIC21.54■■□□□ 1.04
TIMMDC1Q9NPL8 AC021242.3-201ENST00000607598 1377 ntBASIC21.54■■□□□ 1.04
TIMMDC1Q9NPL8 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
TIMMDC1Q9NPL8 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.54■■□□□ 1.04
TIMMDC1Q9NPL8 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.54■■□□□ 1.04
TIMMDC1Q9NPL8 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TIMMDC1Q9NPL8 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
TIMMDC1Q9NPL8 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TIMMDC1Q9NPL8 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.53■■□□□ 1.04
TIMMDC1Q9NPL8 AL356441.2-201ENST00000443009 864 ntBASIC21.53■■□□□ 1.04
TIMMDC1Q9NPL8 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.53■■□□□ 1.04
TIMMDC1Q9NPL8 AC233723.2-201ENST00000623798 2106 ntBASIC21.53■■□□□ 1.04
TIMMDC1Q9NPL8 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
TIMMDC1Q9NPL8 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TIMMDC1Q9NPL8 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TIMMDC1Q9NPL8 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TIMMDC1Q9NPL8 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TIMMDC1Q9NPL8 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TIMMDC1Q9NPL8 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.52■■□□□ 1.04
TIMMDC1Q9NPL8 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.52■■□□□ 1.04
TIMMDC1Q9NPL8 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
TIMMDC1Q9NPL8 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TIMMDC1Q9NPL8 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.52■■□□□ 1.04
TIMMDC1Q9NPL8 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
TIMMDC1Q9NPL8 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TIMMDC1Q9NPL8 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.52■■□□□ 1.04
TIMMDC1Q9NPL8 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TIMMDC1Q9NPL8 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.52■■□□□ 1.04
TIMMDC1Q9NPL8 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.52■■□□□ 1.04
TIMMDC1Q9NPL8 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
TIMMDC1Q9NPL8 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TIMMDC1Q9NPL8 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TIMMDC1Q9NPL8 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TIMMDC1Q9NPL8 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TIMMDC1Q9NPL8 AC131212.1-201ENST00000613771 668 ntBASIC21.51■■□□□ 1.03
TIMMDC1Q9NPL8 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
TIMMDC1Q9NPL8 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TIMMDC1Q9NPL8 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.51■■□□□ 1.03
TIMMDC1Q9NPL8 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TIMMDC1Q9NPL8 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.5■■□□□ 1.03
TIMMDC1Q9NPL8 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TIMMDC1Q9NPL8 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.5■■□□□ 1.03
TIMMDC1Q9NPL8 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.5■■□□□ 1.03
TIMMDC1Q9NPL8 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
TIMMDC1Q9NPL8 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
TIMMDC1Q9NPL8 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TIMMDC1Q9NPL8 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.49■■□□□ 1.03
TIMMDC1Q9NPL8 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.49■■□□□ 1.03
TIMMDC1Q9NPL8 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.49■■□□□ 1.03
TIMMDC1Q9NPL8 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.49■■□□□ 1.03
TIMMDC1Q9NPL8 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.49■■□□□ 1.03
TIMMDC1Q9NPL8 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
TIMMDC1Q9NPL8 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TIMMDC1Q9NPL8 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.49■■□□□ 1.03
TIMMDC1Q9NPL8 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TIMMDC1Q9NPL8 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.49■■□□□ 1.03
TIMMDC1Q9NPL8 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
TIMMDC1Q9NPL8 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TIMMDC1Q9NPL8 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.49■■□□□ 1.03
TIMMDC1Q9NPL8 AC090877.2-201ENST00000558441 1738 ntBASIC21.49■■□□□ 1.03
TIMMDC1Q9NPL8 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
TIMMDC1Q9NPL8 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TIMMDC1Q9NPL8 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TIMMDC1Q9NPL8 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
TIMMDC1Q9NPL8 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.48■■□□□ 1.03
TIMMDC1Q9NPL8 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.48■■□□□ 1.03
TIMMDC1Q9NPL8 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.48■■□□□ 1.03
TIMMDC1Q9NPL8 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TIMMDC1Q9NPL8 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TIMMDC1Q9NPL8 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TIMMDC1Q9NPL8 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
TIMMDC1Q9NPL8 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TIMMDC1Q9NPL8 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.47■■□□□ 1.03
TIMMDC1Q9NPL8 TSPY9P-201ENST00000440215 945 ntBASIC21.47■■□□□ 1.03
TIMMDC1Q9NPL8 TSPY11P-201ENST00000442607 1045 ntBASIC21.47■■□□□ 1.03
TIMMDC1Q9NPL8 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.47■■□□□ 1.03
TIMMDC1Q9NPL8 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.47■■□□□ 1.03
TIMMDC1Q9NPL8 AC092028.1-203ENST00000608262 953 ntBASIC21.47■■□□□ 1.03
TIMMDC1Q9NPL8 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.47■■□□□ 1.03
TIMMDC1Q9NPL8 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TIMMDC1Q9NPL8 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TIMMDC1Q9NPL8 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.47■■□□□ 1.03
TIMMDC1Q9NPL8 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
TIMMDC1Q9NPL8 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.47■■□□□ 1.03
TIMMDC1Q9NPL8 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
TIMMDC1Q9NPL8 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TIMMDC1Q9NPL8 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TIMMDC1Q9NPL8 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms