Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CDH23Q9H251 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
CDH23Q9H251 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CDH23Q9H251 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CDH23Q9H251 AL354811.1-201ENST00000610286 706 ntBASIC24.38■■□□□ 1.49
CDH23Q9H251 GTSE1-AS1-202ENST00000623117 1518 ntBASIC24.38■■□□□ 1.49
CDH23Q9H251 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
CDH23Q9H251 AC126544.1-201ENST00000580842 1059 ntBASIC24.38■■□□□ 1.49
CDH23Q9H251 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC24.38■■□□□ 1.49
CDH23Q9H251 AC241377.3-202ENST00000626088 1088 ntBASIC24.38■■□□□ 1.49
CDH23Q9H251 AC241585.3-202ENST00000628937 1088 ntBASIC24.38■■□□□ 1.49
CDH23Q9H251 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC24.38■■□□□ 1.49
CDH23Q9H251 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CDH23Q9H251 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC24.37■■□□□ 1.49
CDH23Q9H251 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CDH23Q9H251 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CDH23Q9H251 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CDH23Q9H251 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CDH23Q9H251 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
CDH23Q9H251 HSCB-202ENST00000398941 955 ntTSL 2 BASIC24.37■■□□□ 1.49
CDH23Q9H251 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC24.37■■□□□ 1.49
CDH23Q9H251 IGHV3-19-201ENST00000521488 291 ntBASIC24.37■■□□□ 1.49
CDH23Q9H251 AC097639.1-201ENST00000565519 1891 ntBASIC24.36■■□□□ 1.49
CDH23Q9H251 GUSBP6-202ENST00000438529 1198 ntBASIC24.36■■□□□ 1.49
CDH23Q9H251 GAMT-205ENST00000640762 751 ntTSL 5 BASIC24.36■■□□□ 1.49
CDH23Q9H251 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC24.36■■□□□ 1.49
CDH23Q9H251 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC24.36■■□□□ 1.49
CDH23Q9H251 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CDH23Q9H251 CD99P1-205ENST00000527459 561 ntBASIC24.36■■□□□ 1.49
CDH23Q9H251 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
CDH23Q9H251 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC24.36■■□□□ 1.49
CDH23Q9H251 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
CDH23Q9H251 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC24.36■■□□□ 1.49
CDH23Q9H251 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
CDH23Q9H251 STX7-201ENST00000367937 1090 ntTSL 5 BASIC24.35■■□□□ 1.49
CDH23Q9H251 AL109923.1-201ENST00000618799 583 ntBASIC24.35■■□□□ 1.49
CDH23Q9H251 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CDH23Q9H251 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC24.35■■□□□ 1.49
CDH23Q9H251 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC24.35■■□□□ 1.49
CDH23Q9H251 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
CDH23Q9H251 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
CDH23Q9H251 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CDH23Q9H251 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC24.34■■□□□ 1.49
CDH23Q9H251 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC24.34■■□□□ 1.49
CDH23Q9H251 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
CDH23Q9H251 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CDH23Q9H251 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CDH23Q9H251 MIR572-201ENST00000384983 95 ntBASIC24.34■■□□□ 1.49
CDH23Q9H251 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC24.34■■□□□ 1.49
CDH23Q9H251 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
CDH23Q9H251 KRT18P6-201ENST00000555540 1265 ntBASIC24.34■■□□□ 1.49
CDH23Q9H251 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CDH23Q9H251 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
CDH23Q9H251 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CDH23Q9H251 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC24.33■■□□□ 1.49
CDH23Q9H251 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CDH23Q9H251 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CDH23Q9H251 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
CDH23Q9H251 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC24.33■■□□□ 1.49
CDH23Q9H251 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
CDH23Q9H251 WT1-AS_3.1-201ENST00000613262 234 ntBASIC24.33■■□□□ 1.49
CDH23Q9H251 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC24.33■■□□□ 1.48
CDH23Q9H251 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC24.33■■□□□ 1.48
CDH23Q9H251 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
CDH23Q9H251 AC142086.2-201ENST00000569753 217 ntBASIC24.33■■□□□ 1.48
CDH23Q9H251 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC24.32■■□□□ 1.48
CDH23Q9H251 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC24.32■■□□□ 1.48
CDH23Q9H251 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC24.32■■□□□ 1.48
CDH23Q9H251 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC24.32■■□□□ 1.48
CDH23Q9H251 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CDH23Q9H251 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC24.32■■□□□ 1.48
CDH23Q9H251 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC24.32■■□□□ 1.48
CDH23Q9H251 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC24.32■■□□□ 1.48
CDH23Q9H251 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
CDH23Q9H251 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC24.31■■□□□ 1.48
CDH23Q9H251 MIR663A-201ENST00000385250 93 ntBASIC24.31■■□□□ 1.48
CDH23Q9H251 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC24.31■■□□□ 1.48
CDH23Q9H251 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
CDH23Q9H251 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC24.31■■□□□ 1.48
CDH23Q9H251 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC24.31■■□□□ 1.48
CDH23Q9H251 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CDH23Q9H251 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC24.31■■□□□ 1.48
CDH23Q9H251 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC24.31■■□□□ 1.48
CDH23Q9H251 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC24.3■■□□□ 1.48
CDH23Q9H251 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
CDH23Q9H251 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC24.3■■□□□ 1.48
CDH23Q9H251 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
CDH23Q9H251 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CDH23Q9H251 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC24.3■■□□□ 1.48
CDH23Q9H251 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
CDH23Q9H251 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC24.3■■□□□ 1.48
CDH23Q9H251 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CDH23Q9H251 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC24.3■■□□□ 1.48
CDH23Q9H251 AC016769.1-201ENST00000409132 1010 ntBASIC24.29■■□□□ 1.48
CDH23Q9H251 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CDH23Q9H251 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC24.29■■□□□ 1.48
CDH23Q9H251 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC24.29■■□□□ 1.48
CDH23Q9H251 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CDH23Q9H251 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
CDH23Q9H251 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC24.29■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms