Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 ACLY-203ENST00000393896 3682 ntAPPRIS ALT1 TSL 2 BASIC10.16□□□□□ -0.781e-14■■■■□ 25.4
CSTF2TQ9H0L4 AC018552.2-201ENST00000563062 804 ntTSL 5 BASIC9.25□□□□□ -0.931e-7■■■■□ 25.4
CSTF2TQ9H0L4 AL133343.1-202ENST00000375671 789 ntTSL 59.19□□□□□ -0.941e-7■■■■□ 25.4
CSTF2TQ9H0L4 ACLY-202ENST00000353196 4318 ntAPPRIS ALT1 TSL 5 BASIC8.79□□□□□ -11e-14■■■■□ 25.4
CSTF2TQ9H0L4 ACLY-207ENST00000590151 4309 ntAPPRIS P4 TSL 1 (best) BASIC8.2□□□□□ -1.11e-14■■■■□ 25.4
CSTF2TQ9H0L4 ACLY-201ENST00000352035 4339 ntAPPRIS P4 TSL 1 (best) BASIC8.15□□□□□ -1.111e-14■■■■□ 25.4
CSTF2TQ9H0L4 ANXA4-209ENST00000477632 3949 ntTSL 1 (best)8.05□□□□□ -1.121e-9■■■■□ 25.4
CSTF2TQ9H0L4 ANXA4-203ENST00000418066 905 ntTSL 36.07□□□□□ -1.441e-9■■■■□ 25.4
CSTF2TQ9H0L4 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.76■□□□□ 0.272e-6■■■■□ 25.4
CSTF2TQ9H0L4 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.161e-6■■■■□ 25.4
CSTF2TQ9H0L4 AHDC1-203ENST00000480033 546 ntTSL 517.11■□□□□ 0.331e-6■■■■□ 25.4
CSTF2TQ9H0L4 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.794e-7■■■■□ 25.4
CSTF2TQ9H0L4 RXRA-203ENST00000484822 5215 ntTSL 214.48□□□□□ -0.099e-8■■■■□ 25.4
CSTF2TQ9H0L4 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.762e-6■■■■□ 25.4
CSTF2TQ9H0L4 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.12■□□□□ 0.012e-6■■■■□ 25.4
CSTF2TQ9H0L4 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14□□□□□ -0.172e-6■■■■□ 25.4
CSTF2TQ9H0L4 SEPT5-211ENST00000455843 4113 ntTSL 1 (best)13.59□□□□□ -0.235e-7■■■■□ 25.4
CSTF2TQ9H0L4 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.24■□□□□ 0.033e-7■■■■□ 25.4
CSTF2TQ9H0L4 SLC50A1-205ENST00000465546 538 ntTSL 313.45□□□□□ -0.263e-7■■■■□ 25.4
CSTF2TQ9H0L4 SLC50A1-206ENST00000475824 770 ntTSL 510.83□□□□□ -0.683e-7■■■■□ 25.4
CSTF2TQ9H0L4 SLC50A1-212ENST00000490770 991 ntTSL 310.13□□□□□ -0.793e-7■■■■□ 25.4
CSTF2TQ9H0L4 PKD1-203ENST00000423118 14135 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.832e-7■■■■□ 25.3
CSTF2TQ9H0L4 PKD1-201ENST00000262304 14138 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.842e-7■■■■□ 25.3
CSTF2TQ9H0L4 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.361e-7■■■■□ 25.3
CSTF2TQ9H0L4 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.21e-7■■■■□ 25.3
CSTF2TQ9H0L4 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.79■□□□□ 0.121e-7■■■■□ 25.3
CSTF2TQ9H0L4 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.77■□□□□ 0.69e-8■■■■□ 25.3
CSTF2TQ9H0L4 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.249e-8■■■■□ 25.3
CSTF2TQ9H0L4 MTHFD1L-202ENST00000367308 996 ntTSL 516.41■□□□□ 0.229e-8■■■■□ 25.3
CSTF2TQ9H0L4 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.079e-8■■■■□ 25.3
CSTF2TQ9H0L4 ADARB1-208ENST00000462214 587 ntTSL 37.84□□□□□ -1.157e-7■■■■□ 25.3
CSTF2TQ9H0L4 MKLN1-208ENST00000494286 582 ntTSL 417.15■□□□□ 0.348e-9■■■■□ 25.3
CSTF2TQ9H0L4 MKLN1-205ENST00000446815 551 ntTSL 416.97■□□□□ 0.318e-9■■■■□ 25.3
CSTF2TQ9H0L4 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC13.21□□□□□ -0.298e-9■■■■□ 25.3
CSTF2TQ9H0L4 MKLN1-209ENST00000494785 2386 ntTSL 1 (best)10.14□□□□□ -0.798e-9■■■■□ 25.3
CSTF2TQ9H0L4 MKLN1-206ENST00000458153 2448 ntTSL 28.68□□□□□ -1.028e-9■■■■□ 25.3
CSTF2TQ9H0L4 MKLN1-202ENST00000416992 864 ntTSL 38.25□□□□□ -1.098e-9■■■■□ 25.3
CSTF2TQ9H0L4 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC8.22□□□□□ -1.098e-9■■■■□ 25.3
CSTF2TQ9H0L4 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.938e-9■■■■□ 25.3
CSTF2TQ9H0L4 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.15□□□□□ -1.747e-7■■■■□ 25.3
CSTF2TQ9H0L4 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.74■□□□□ 0.433e-8■■■■□ 25.3
CSTF2TQ9H0L4 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.253e-8■■■■□ 25.3
CSTF2TQ9H0L4 CDK17-202ENST00000542666 1769 ntTSL 2 BASIC10.57□□□□□ -0.723e-8■■■■□ 25.3
CSTF2TQ9H0L4 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.08■□□□□ 0.642e-7■■■■□ 25.3
CSTF2TQ9H0L4 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.49■□□□□ 0.552e-7■■■■□ 25.3
CSTF2TQ9H0L4 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.99■□□□□ 0.312e-7■■■■□ 25.3
CSTF2TQ9H0L4 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.52■□□□□ 0.072e-7■■■■□ 25.3
CSTF2TQ9H0L4 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.43□□□□□ -0.262e-7■■■■□ 25.3
CSTF2TQ9H0L4 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.362e-7■■■■□ 25.3
CSTF2TQ9H0L4 HNRNPLL-201ENST00000272249 2190 ntTSL 25.87□□□□□ -1.472e-7■■■■□ 25.3
CSTF2TQ9H0L4 RAD51B-205ENST00000471583 1536 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.862e-6■■■■□ 25.3
CSTF2TQ9H0L4 RAD51B-208ENST00000479335 1615 ntTSL 1 (best)8.8□□□□□ -12e-6■■■■□ 25.3
CSTF2TQ9H0L4 RAD51B-204ENST00000469165 1158 ntTSL 37.89□□□□□ -1.152e-6■■■■□ 25.3
CSTF2TQ9H0L4 RAD51B-203ENST00000468382 829 ntTSL 57.71□□□□□ -1.182e-6■■■■□ 25.3
CSTF2TQ9H0L4 RAD51B-212ENST00000488612 1550 ntTSL 1 (best) BASIC7.35□□□□□ -1.232e-6■■■■□ 25.3
CSTF2TQ9H0L4 RAD51B-211ENST00000487861 1673 ntTSL 1 (best) BASIC7.28□□□□□ -1.242e-6■■■■□ 25.3
CSTF2TQ9H0L4 RAD51B-214ENST00000497460 546 ntTSL 47.08□□□□□ -1.282e-6■■■■□ 25.3
CSTF2TQ9H0L4 RAD51B-213ENST00000492236 417 ntTSL 36.93□□□□□ -1.32e-6■■■■□ 25.3
CSTF2TQ9H0L4 RAD51B-202ENST00000460526 794 ntTSL 36.71□□□□□ -1.342e-6■■■■□ 25.3
CSTF2TQ9H0L4 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.07□□□□□ -1.442e-6■■■■□ 25.3
CSTF2TQ9H0L4 RAD51B-207ENST00000478014 618 ntTSL 36.02□□□□□ -1.452e-6■■■■□ 25.3
CSTF2TQ9H0L4 RAD51B-216ENST00000553595 795 ntTSL 35.73□□□□□ -1.492e-6■■■■□ 25.3
CSTF2TQ9H0L4 RAD51B-219ENST00000554244 669 ntTSL 35.38□□□□□ -1.552e-6■■■■□ 25.3
CSTF2TQ9H0L4 ANKRD11-212ENST00000567699 412 ntTSL 514.21□□□□□ -0.133e-7■■■■□ 25.2
CSTF2TQ9H0L4 C1orf159-214ENST00000473600 793 ntTSL 315.49■□□□□ 0.078e-8■■■■□ 25.2
CSTF2TQ9H0L4 C1orf159-208ENST00000442117 554 ntAPPRIS ALT2 TSL 514.56□□□□□ -0.088e-8■■■■□ 25.2
CSTF2TQ9H0L4 C1orf159-211ENST00000465822 1933 ntTSL 214.16□□□□□ -0.148e-8■■■■□ 25.2
CSTF2TQ9H0L4 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.198e-8■■■■□ 25.2
CSTF2TQ9H0L4 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.28e-8■■■■□ 25.2
CSTF2TQ9H0L4 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.017e-13■■■■□ 25.2
CSTF2TQ9H0L4 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC12.5□□□□□ -0.412e-7■■■■□ 25.2
CSTF2TQ9H0L4 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.63■□□□□ 0.091e-7■■■■□ 25.2
CSTF2TQ9H0L4 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.332e-7■■■■□ 25.2
CSTF2TQ9H0L4 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.42e-7■■■■□ 25.2
CSTF2TQ9H0L4 TAB2-202ENST00000461481 524 ntTSL 313.04□□□□□ -0.324e-15■■■■□ 25.2
CSTF2TQ9H0L4 ADGRD1-209ENST00000540207 718 ntTSL 313.96□□□□□ -0.171e-6■■■■□ 25.2
CSTF2TQ9H0L4 ADGRD1-204ENST00000446583 5529 ntTSL 513.36□□□□□ -0.271e-6■■■■□ 25.2
CSTF2TQ9H0L4 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.381e-6■■■■□ 25.2
CSTF2TQ9H0L4 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.41e-6■■■■□ 25.2
CSTF2TQ9H0L4 ADGRD1-207ENST00000537489 565 ntTSL 412.06□□□□□ -0.481e-6■■■■□ 25.2
CSTF2TQ9H0L4 ADGRD1-202ENST00000335486 2892 ntTSL 1 (best) BASIC11.72□□□□□ -0.531e-6■■■■□ 25.2
CSTF2TQ9H0L4 ADGRD1-203ENST00000376682 4135 ntTSL 211.14□□□□□ -0.631e-6■■■■□ 25.2
CSTF2TQ9H0L4 ADGRD1-213ENST00000543617 1182 ntTSL 1 (best) BASIC10.46□□□□□ -0.731e-6■■■■□ 25.2
CSTF2TQ9H0L4 HMGB3-201ENST00000325307 3560 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.951e-6■■■■□ 25.2
CSTF2TQ9H0L4 ADGRD1-205ENST00000535015 2776 ntTSL 1 (best) BASIC9.01□□□□□ -0.971e-6■■■■□ 25.2
CSTF2TQ9H0L4 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.74■■□□□ 1.074e-7■■■■□ 25.2
CSTF2TQ9H0L4 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.43■■□□□ 1.024e-7■■■■□ 25.2
CSTF2TQ9H0L4 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.624e-7■■■■□ 25.2
CSTF2TQ9H0L4 PYCR1-212ENST00000583564 377 ntTSL 318.81■□□□□ 0.64e-7■■■■□ 25.2
CSTF2TQ9H0L4 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.91■□□□□ 0.464e-7■■■■□ 25.2
CSTF2TQ9H0L4 PYCR1-209ENST00000579698 572 ntTSL 417.65■□□□□ 0.424e-7■■■■□ 25.2
CSTF2TQ9H0L4 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.33■□□□□ 0.24e-7■■■■□ 25.2
CSTF2TQ9H0L4 PYCR1-214ENST00000585215 767 ntTSL 415.98■□□□□ 0.154e-7■■■■□ 25.2
CSTF2TQ9H0L4 PYCR1-210ENST00000581271 528 ntTSL 415.76■□□□□ 0.114e-7■■■■□ 25.2
CSTF2TQ9H0L4 PYCR1-206ENST00000577624 510 ntTSL 315.72■□□□□ 0.114e-7■■■■□ 25.2
CSTF2TQ9H0L4 PYCR1-205ENST00000405481 841 ntTSL 214.12□□□□□ -0.154e-7■■■■□ 25.2
CSTF2TQ9H0L4 PYCR1-211ENST00000582198 868 ntTSL 512.99□□□□□ -0.334e-7■■■■□ 25.2
CSTF2TQ9H0L4 PYCR1-215ENST00000585244 578 ntTSL 412.88□□□□□ -0.354e-7■■■■□ 25.2
CSTF2TQ9H0L4 PPFIA1-207ENST00000526347 862 ntTSL 510.82□□□□□ -0.684e-7■■■■□ 25.2
CSTF2TQ9H0L4 PPFIA1-214ENST00000530390 879 ntTSL 510.67□□□□□ -0.74e-7■■■■□ 25.2
Retrieved 100 of 19,151 protein–RNA pairs in 389.5 ms