Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LIMD2Q9BT23 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LIMD2Q9BT23 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
LIMD2Q9BT23 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC13.32□□□□□ -0.28
LIMD2Q9BT23 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC13.32□□□□□ -0.28
LIMD2Q9BT23 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
LIMD2Q9BT23 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LIMD2Q9BT23 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
LIMD2Q9BT23 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC13.32□□□□□ -0.28
LIMD2Q9BT23 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC13.32□□□□□ -0.28
LIMD2Q9BT23 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
LIMD2Q9BT23 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LIMD2Q9BT23 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
LIMD2Q9BT23 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
LIMD2Q9BT23 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LIMD2Q9BT23 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
LIMD2Q9BT23 SLC25A24-204ENST00000569674 2357 ntBASIC13.31□□□□□ -0.28
LIMD2Q9BT23 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LIMD2Q9BT23 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC13.31□□□□□ -0.28
LIMD2Q9BT23 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LIMD2Q9BT23 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LIMD2Q9BT23 THA1P-201ENST00000590384 1145 ntBASIC13.31□□□□□ -0.28
LIMD2Q9BT23 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
LIMD2Q9BT23 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LIMD2Q9BT23 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
LIMD2Q9BT23 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
LIMD2Q9BT23 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LIMD2Q9BT23 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
LIMD2Q9BT23 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LIMD2Q9BT23 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LIMD2Q9BT23 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
LIMD2Q9BT23 AL022069.1-201ENST00000568025 1636 ntBASIC13.31□□□□□ -0.28
LIMD2Q9BT23 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LIMD2Q9BT23 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
LIMD2Q9BT23 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LIMD2Q9BT23 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC13.3□□□□□ -0.28
LIMD2Q9BT23 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LIMD2Q9BT23 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LIMD2Q9BT23 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LIMD2Q9BT23 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
LIMD2Q9BT23 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LIMD2Q9BT23 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LIMD2Q9BT23 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC13.3□□□□□ -0.28
LIMD2Q9BT23 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LIMD2Q9BT23 AC004987.1-201ENST00000428627 508 ntBASIC13.3□□□□□ -0.28
LIMD2Q9BT23 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LIMD2Q9BT23 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC13.3□□□□□ -0.28
LIMD2Q9BT23 GAK-223ENST00000628912 497 ntTSL 5 BASIC13.3□□□□□ -0.28
LIMD2Q9BT23 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
LIMD2Q9BT23 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LIMD2Q9BT23 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
LIMD2Q9BT23 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
LIMD2Q9BT23 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LIMD2Q9BT23 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
LIMD2Q9BT23 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC13.3□□□□□ -0.28
LIMD2Q9BT23 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC13.3□□□□□ -0.28
LIMD2Q9BT23 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
LIMD2Q9BT23 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
LIMD2Q9BT23 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LIMD2Q9BT23 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LIMD2Q9BT23 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
LIMD2Q9BT23 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LIMD2Q9BT23 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LIMD2Q9BT23 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
LIMD2Q9BT23 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC13.29□□□□□ -0.28
LIMD2Q9BT23 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LIMD2Q9BT23 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LIMD2Q9BT23 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LIMD2Q9BT23 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LIMD2Q9BT23 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
LIMD2Q9BT23 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
LIMD2Q9BT23 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
LIMD2Q9BT23 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LIMD2Q9BT23 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LIMD2Q9BT23 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LIMD2Q9BT23 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LIMD2Q9BT23 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LIMD2Q9BT23 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LIMD2Q9BT23 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LIMD2Q9BT23 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC13.28□□□□□ -0.28
LIMD2Q9BT23 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
LIMD2Q9BT23 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC13.28□□□□□ -0.28
LIMD2Q9BT23 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC13.28□□□□□ -0.28
LIMD2Q9BT23 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
LIMD2Q9BT23 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LIMD2Q9BT23 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
LIMD2Q9BT23 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LIMD2Q9BT23 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
LIMD2Q9BT23 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
LIMD2Q9BT23 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
LIMD2Q9BT23 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
LIMD2Q9BT23 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LIMD2Q9BT23 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LIMD2Q9BT23 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LIMD2Q9BT23 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
LIMD2Q9BT23 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC13.27□□□□□ -0.28
LIMD2Q9BT23 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
LIMD2Q9BT23 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
LIMD2Q9BT23 IDNK-201ENST00000376417 511 ntTSL 5 BASIC13.27□□□□□ -0.29
LIMD2Q9BT23 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms