Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC18.76■□□□□ 0.59
SSX3Q99909 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.76■□□□□ 0.59
SSX3Q99909 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SSX3Q99909 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.76■□□□□ 0.59
SSX3Q99909 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SSX3Q99909 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.76■□□□□ 0.59
SSX3Q99909 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SSX3Q99909 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SSX3Q99909 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.76■□□□□ 0.59
SSX3Q99909 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SSX3Q99909 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SSX3Q99909 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SSX3Q99909 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SSX3Q99909 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SSX3Q99909 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC18.75■□□□□ 0.59
SSX3Q99909 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SSX3Q99909 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SSX3Q99909 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
SSX3Q99909 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC18.75■□□□□ 0.59
SSX3Q99909 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SSX3Q99909 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.75■□□□□ 0.59
SSX3Q99909 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.75■□□□□ 0.59
SSX3Q99909 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC18.75■□□□□ 0.59
SSX3Q99909 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC18.75■□□□□ 0.59
SSX3Q99909 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
SSX3Q99909 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
SSX3Q99909 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
SSX3Q99909 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SSX3Q99909 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SSX3Q99909 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SSX3Q99909 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SSX3Q99909 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SSX3Q99909 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.74■□□□□ 0.59
SSX3Q99909 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SSX3Q99909 MTDHP2-201ENST00000601468 714 ntBASIC18.74■□□□□ 0.59
SSX3Q99909 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.74■□□□□ 0.59
SSX3Q99909 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SSX3Q99909 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SSX3Q99909 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC18.73■□□□□ 0.59
SSX3Q99909 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.73■□□□□ 0.59
SSX3Q99909 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.73■□□□□ 0.59
SSX3Q99909 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SSX3Q99909 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SSX3Q99909 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.73■□□□□ 0.59
SSX3Q99909 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SSX3Q99909 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SSX3Q99909 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SSX3Q99909 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SSX3Q99909 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC18.73■□□□□ 0.59
SSX3Q99909 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SSX3Q99909 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.72■□□□□ 0.59
SSX3Q99909 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC18.72■□□□□ 0.59
SSX3Q99909 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SSX3Q99909 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SSX3Q99909 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.72■□□□□ 0.59
SSX3Q99909 AC010997.5-201ENST00000609182 354 ntBASIC18.72■□□□□ 0.59
SSX3Q99909 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.72■□□□□ 0.59
SSX3Q99909 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SSX3Q99909 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
SSX3Q99909 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SSX3Q99909 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC18.71■□□□□ 0.59
SSX3Q99909 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC18.71■□□□□ 0.59
SSX3Q99909 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SSX3Q99909 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SSX3Q99909 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SSX3Q99909 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SSX3Q99909 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
SSX3Q99909 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
SSX3Q99909 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SSX3Q99909 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SSX3Q99909 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSX3Q99909 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSX3Q99909 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSX3Q99909 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
SSX3Q99909 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SSX3Q99909 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SSX3Q99909 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSX3Q99909 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSX3Q99909 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.7■□□□□ 0.58
SSX3Q99909 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.7■□□□□ 0.58
SSX3Q99909 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.7■□□□□ 0.58
SSX3Q99909 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC18.7■□□□□ 0.58
SSX3Q99909 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.7■□□□□ 0.58
SSX3Q99909 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SSX3Q99909 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC18.7■□□□□ 0.58
SSX3Q99909 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSX3Q99909 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSX3Q99909 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SSX3Q99909 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSX3Q99909 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.69■□□□□ 0.58
SSX3Q99909 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSX3Q99909 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSX3Q99909 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSX3Q99909 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.69■□□□□ 0.58
SSX3Q99909 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSX3Q99909 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSX3Q99909 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSX3Q99909 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SSX3Q99909 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SSX3Q99909 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms