Protein–RNA interactions for Protein: Q99788

CMKLR1, Chemokine-like receptor 1, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMKLR1Q99788 HLA-L-211ENST00000482052 1765 ntBASIC21.64■■□□□ 1.05
CMKLR1Q99788 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CMKLR1Q99788 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CMKLR1Q99788 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.63■■□□□ 1.05
CMKLR1Q99788 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.63■■□□□ 1.05
CMKLR1Q99788 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CMKLR1Q99788 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CMKLR1Q99788 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.63■■□□□ 1.05
CMKLR1Q99788 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.63■■□□□ 1.05
CMKLR1Q99788 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.63■■□□□ 1.05
CMKLR1Q99788 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.63■■□□□ 1.05
CMKLR1Q99788 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CMKLR1Q99788 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
CMKLR1Q99788 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CMKLR1Q99788 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
CMKLR1Q99788 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.63■■□□□ 1.05
CMKLR1Q99788 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CMKLR1Q99788 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CMKLR1Q99788 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CMKLR1Q99788 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CMKLR1Q99788 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CMKLR1Q99788 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CMKLR1Q99788 AL162430.1-201ENST00000480705 870 ntBASIC21.62■■□□□ 1.05
CMKLR1Q99788 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.62■■□□□ 1.05
CMKLR1Q99788 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.62■■□□□ 1.05
CMKLR1Q99788 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.62■■□□□ 1.05
CMKLR1Q99788 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.62■■□□□ 1.05
CMKLR1Q99788 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CMKLR1Q99788 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.62■■□□□ 1.05
CMKLR1Q99788 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.62■■□□□ 1.05
CMKLR1Q99788 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CMKLR1Q99788 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CMKLR1Q99788 ALDH1A3-203ENST00000557963 1670 ntBASIC21.61■■□□□ 1.05
CMKLR1Q99788 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.61■■□□□ 1.05
CMKLR1Q99788 pRNA.6-201ENST00000610482 90 ntBASIC21.61■■□□□ 1.05
CMKLR1Q99788 pRNA.5-201ENST00000612139 90 ntBASIC21.61■■□□□ 1.05
CMKLR1Q99788 pRNA.11-201ENST00000618423 90 ntBASIC21.61■■□□□ 1.05
CMKLR1Q99788 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.61■■□□□ 1.05
CMKLR1Q99788 pRNA.13-201ENST00000619112 90 ntBASIC21.61■■□□□ 1.05
CMKLR1Q99788 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CMKLR1Q99788 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CMKLR1Q99788 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
CMKLR1Q99788 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.6■■□□□ 1.05
CMKLR1Q99788 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CMKLR1Q99788 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.6■■□□□ 1.05
CMKLR1Q99788 AC126544.1-201ENST00000580842 1059 ntBASIC21.6■■□□□ 1.05
CMKLR1Q99788 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.6■■□□□ 1.05
CMKLR1Q99788 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CMKLR1Q99788 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CMKLR1Q99788 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CMKLR1Q99788 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CMKLR1Q99788 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CMKLR1Q99788 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.59■■□□□ 1.05
CMKLR1Q99788 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
CMKLR1Q99788 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CMKLR1Q99788 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CMKLR1Q99788 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CMKLR1Q99788 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.58■■□□□ 1.05
CMKLR1Q99788 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CMKLR1Q99788 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.58■■□□□ 1.05
CMKLR1Q99788 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CMKLR1Q99788 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.58■■□□□ 1.05
CMKLR1Q99788 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.58■■□□□ 1.05
CMKLR1Q99788 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.58■■□□□ 1.05
CMKLR1Q99788 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.58■■□□□ 1.05
CMKLR1Q99788 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CMKLR1Q99788 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CMKLR1Q99788 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CMKLR1Q99788 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CMKLR1Q99788 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CMKLR1Q99788 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CMKLR1Q99788 AC141586.4-201ENST00000624558 1573 ntBASIC21.57■■□□□ 1.04
CMKLR1Q99788 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CMKLR1Q99788 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.56■■□□□ 1.04
CMKLR1Q99788 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.56■■□□□ 1.04
CMKLR1Q99788 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.56■■□□□ 1.04
CMKLR1Q99788 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
CMKLR1Q99788 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CMKLR1Q99788 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CMKLR1Q99788 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CMKLR1Q99788 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CMKLR1Q99788 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CMKLR1Q99788 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CMKLR1Q99788 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CMKLR1Q99788 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CMKLR1Q99788 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.55■■□□□ 1.04
CMKLR1Q99788 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CMKLR1Q99788 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CMKLR1Q99788 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CMKLR1Q99788 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CMKLR1Q99788 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
CMKLR1Q99788 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CMKLR1Q99788 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
CMKLR1Q99788 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CMKLR1Q99788 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.54■■□□□ 1.04
CMKLR1Q99788 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.54■■□□□ 1.04
CMKLR1Q99788 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
CMKLR1Q99788 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.54■■□□□ 1.04
CMKLR1Q99788 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CMKLR1Q99788 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms