Protein–RNA interactions for Protein: Q96N87

SLC6A18, Sodium-dependent neutral amino acid transporter B(0)AT3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A18Q96N87 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SLC6A18Q96N87 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC22.47■■□□□ 1.19
SLC6A18Q96N87 AC104564.3-201ENST00000582367 638 ntBASIC22.47■■□□□ 1.19
SLC6A18Q96N87 MIR6821-201ENST00000617625 74 ntBASIC22.47■■□□□ 1.19
SLC6A18Q96N87 ANKRD20A6P-201ENST00000618763 204 ntBASIC22.47■■□□□ 1.19
SLC6A18Q96N87 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC22.47■■□□□ 1.19
SLC6A18Q96N87 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SLC6A18Q96N87 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SLC6A18Q96N87 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SLC6A18Q96N87 VGF-203ENST00000611537 1622 ntTSL 5 BASIC22.46■■□□□ 1.19
SLC6A18Q96N87 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SLC6A18Q96N87 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC22.46■■□□□ 1.19
SLC6A18Q96N87 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC22.46■■□□□ 1.19
SLC6A18Q96N87 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
SLC6A18Q96N87 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
SLC6A18Q96N87 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC22.46■■□□□ 1.19
SLC6A18Q96N87 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
SLC6A18Q96N87 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
SLC6A18Q96N87 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
SLC6A18Q96N87 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SLC6A18Q96N87 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.45■■□□□ 1.18
SLC6A18Q96N87 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
SLC6A18Q96N87 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
SLC6A18Q96N87 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SLC6A18Q96N87 IRS3P-201ENST00000223076 1006 ntBASIC22.44■■□□□ 1.18
SLC6A18Q96N87 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SLC6A18Q96N87 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SLC6A18Q96N87 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
SLC6A18Q96N87 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.44■■□□□ 1.18
SLC6A18Q96N87 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SLC6A18Q96N87 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
SLC6A18Q96N87 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SLC6A18Q96N87 AC097381.1-201ENST00000429019 1296 ntBASIC22.44■■□□□ 1.18
SLC6A18Q96N87 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC22.44■■□□□ 1.18
SLC6A18Q96N87 ALDH1A3-203ENST00000557963 1670 ntBASIC22.44■■□□□ 1.18
SLC6A18Q96N87 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC22.44■■□□□ 1.18
SLC6A18Q96N87 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC22.44■■□□□ 1.18
SLC6A18Q96N87 AC087623.3-201ENST00000607047 1098 ntBASIC22.44■■□□□ 1.18
SLC6A18Q96N87 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
SLC6A18Q96N87 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
SLC6A18Q96N87 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
SLC6A18Q96N87 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SLC6A18Q96N87 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
SLC6A18Q96N87 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
SLC6A18Q96N87 AC233992.3-201ENST00000607491 485 ntBASIC22.43■■□□□ 1.18
SLC6A18Q96N87 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC22.43■■□□□ 1.18
SLC6A18Q96N87 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SLC6A18Q96N87 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SLC6A18Q96N87 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SLC6A18Q96N87 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC22.42■■□□□ 1.18
SLC6A18Q96N87 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SLC6A18Q96N87 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SLC6A18Q96N87 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SLC6A18Q96N87 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SLC6A18Q96N87 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC22.42■■□□□ 1.18
SLC6A18Q96N87 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC22.42■■□□□ 1.18
SLC6A18Q96N87 RHOF-204ENST00000537265 699 ntTSL 2 BASIC22.42■■□□□ 1.18
SLC6A18Q96N87 pRNA.6-201ENST00000610482 90 ntBASIC22.42■■□□□ 1.18
SLC6A18Q96N87 pRNA.5-201ENST00000612139 90 ntBASIC22.42■■□□□ 1.18
SLC6A18Q96N87 pRNA.11-201ENST00000618423 90 ntBASIC22.42■■□□□ 1.18
SLC6A18Q96N87 pRNA.13-201ENST00000619112 90 ntBASIC22.42■■□□□ 1.18
SLC6A18Q96N87 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SLC6A18Q96N87 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
SLC6A18Q96N87 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SLC6A18Q96N87 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SLC6A18Q96N87 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SLC6A18Q96N87 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SLC6A18Q96N87 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SLC6A18Q96N87 BX842568.3-201ENST00000418104 571 ntBASIC22.41■■□□□ 1.18
SLC6A18Q96N87 PLD4-205ENST00000553861 667 ntTSL 2 BASIC22.41■■□□□ 1.18
SLC6A18Q96N87 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
SLC6A18Q96N87 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.41■■□□□ 1.18
SLC6A18Q96N87 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
SLC6A18Q96N87 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SLC6A18Q96N87 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SLC6A18Q96N87 GRAMD4P2-201ENST00000423297 1097 ntBASIC22.4■■□□□ 1.18
SLC6A18Q96N87 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SLC6A18Q96N87 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
SLC6A18Q96N87 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SLC6A18Q96N87 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
SLC6A18Q96N87 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
SLC6A18Q96N87 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC22.39■■□□□ 1.17
SLC6A18Q96N87 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
SLC6A18Q96N87 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
SLC6A18Q96N87 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SLC6A18Q96N87 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
SLC6A18Q96N87 PARL-206ENST00000435888 1098 ntTSL 5 BASIC22.38■■□□□ 1.17
SLC6A18Q96N87 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC22.38■■□□□ 1.17
SLC6A18Q96N87 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC22.38■■□□□ 1.17
SLC6A18Q96N87 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
SLC6A18Q96N87 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC22.38■■□□□ 1.17
SLC6A18Q96N87 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SLC6A18Q96N87 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
SLC6A18Q96N87 EI24-204ENST00000527235 1625 ntTSL 5 BASIC22.38■■□□□ 1.17
SLC6A18Q96N87 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.38■■□□□ 1.17
SLC6A18Q96N87 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SLC6A18Q96N87 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.37■■□□□ 1.17
SLC6A18Q96N87 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SLC6A18Q96N87 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
SLC6A18Q96N87 SNX3-202ENST00000349379 890 ntTSL 2 BASIC22.37■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 226.1 ms