Protein–RNA interactions for Protein: Q96N35

LINC00052, Putative uncharacterized protein encoded by LINC00052, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00052Q96N35 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.56■□□□□ 0.56
LINC00052Q96N35 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LINC00052Q96N35 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
LINC00052Q96N35 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LINC00052Q96N35 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC18.55■□□□□ 0.56
LINC00052Q96N35 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
LINC00052Q96N35 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINC00052Q96N35 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
LINC00052Q96N35 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINC00052Q96N35 HLA-V-202ENST00000446817 847 ntBASIC18.55■□□□□ 0.56
LINC00052Q96N35 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC18.55■□□□□ 0.56
LINC00052Q96N35 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
LINC00052Q96N35 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINC00052Q96N35 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.55■□□□□ 0.56
LINC00052Q96N35 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
LINC00052Q96N35 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINC00052Q96N35 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINC00052Q96N35 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.55■□□□□ 0.56
LINC00052Q96N35 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LINC00052Q96N35 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LINC00052Q96N35 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LINC00052Q96N35 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.54■□□□□ 0.56
LINC00052Q96N35 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LINC00052Q96N35 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC18.54■□□□□ 0.56
LINC00052Q96N35 CHST11-203ENST00000547956 936 ntTSL 2 BASIC18.54■□□□□ 0.56
LINC00052Q96N35 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LINC00052Q96N35 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
LINC00052Q96N35 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
LINC00052Q96N35 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LINC00052Q96N35 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LINC00052Q96N35 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
LINC00052Q96N35 MIR3648-2-201ENST00000581792 180 ntBASIC18.53■□□□□ 0.56
LINC00052Q96N35 MIR7108-201ENST00000614319 87 ntBASIC18.53■□□□□ 0.56
LINC00052Q96N35 MIR3648-1-201ENST00000615959 180 ntBASIC18.53■□□□□ 0.56
LINC00052Q96N35 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
LINC00052Q96N35 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
LINC00052Q96N35 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LINC00052Q96N35 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
LINC00052Q96N35 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LINC00052Q96N35 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LINC00052Q96N35 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LINC00052Q96N35 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.52■□□□□ 0.56
LINC00052Q96N35 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LINC00052Q96N35 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LINC00052Q96N35 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LINC00052Q96N35 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LINC00052Q96N35 AC016575.1-201ENST00000607026 382 ntBASIC18.52■□□□□ 0.56
LINC00052Q96N35 AC148477.6-201ENST00000623746 465 ntBASIC18.52■□□□□ 0.56
LINC00052Q96N35 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
LINC00052Q96N35 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.52■□□□□ 0.55
LINC00052Q96N35 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LINC00052Q96N35 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LINC00052Q96N35 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LINC00052Q96N35 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LINC00052Q96N35 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LINC00052Q96N35 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LINC00052Q96N35 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LINC00052Q96N35 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LINC00052Q96N35 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
LINC00052Q96N35 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LINC00052Q96N35 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.51■□□□□ 0.55
LINC00052Q96N35 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.51■□□□□ 0.55
LINC00052Q96N35 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LINC00052Q96N35 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LINC00052Q96N35 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.5■□□□□ 0.55
LINC00052Q96N35 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
LINC00052Q96N35 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
LINC00052Q96N35 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC18.5■□□□□ 0.55
LINC00052Q96N35 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC18.5■□□□□ 0.55
LINC00052Q96N35 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
LINC00052Q96N35 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LINC00052Q96N35 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC18.5■□□□□ 0.55
LINC00052Q96N35 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC18.5■□□□□ 0.55
LINC00052Q96N35 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
LINC00052Q96N35 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
LINC00052Q96N35 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LINC00052Q96N35 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
LINC00052Q96N35 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC18.49■□□□□ 0.55
LINC00052Q96N35 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LINC00052Q96N35 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC18.49■□□□□ 0.55
LINC00052Q96N35 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC18.49■□□□□ 0.55
LINC00052Q96N35 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
LINC00052Q96N35 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LINC00052Q96N35 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LINC00052Q96N35 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LINC00052Q96N35 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LINC00052Q96N35 MACF1-219ENST00000484793 834 ntTSL 2 BASIC18.49■□□□□ 0.55
LINC00052Q96N35 PVT1-219ENST00000523427 938 ntTSL 3 BASIC18.49■□□□□ 0.55
LINC00052Q96N35 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LINC00052Q96N35 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.49■□□□□ 0.55
LINC00052Q96N35 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LINC00052Q96N35 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LINC00052Q96N35 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LINC00052Q96N35 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LINC00052Q96N35 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC18.48■□□□□ 0.55
LINC00052Q96N35 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LINC00052Q96N35 FBXW4P1-201ENST00000426721 2239 ntBASIC18.48■□□□□ 0.55
LINC00052Q96N35 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LINC00052Q96N35 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LINC00052Q96N35 METRNL-202ENST00000570778 967 ntTSL 5 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms