Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
CFAP54Q96N23 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC22.45■■□□□ 1.18
CFAP54Q96N23 AL354811.1-201ENST00000610286 706 ntBASIC22.45■■□□□ 1.18
CFAP54Q96N23 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC22.45■■□□□ 1.18
CFAP54Q96N23 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.45■■□□□ 1.18
CFAP54Q96N23 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC22.45■■□□□ 1.18
CFAP54Q96N23 AC126544.1-201ENST00000580842 1059 ntBASIC22.45■■□□□ 1.18
CFAP54Q96N23 LBH-205ENST00000407930 756 ntTSL 2 BASIC22.44■■□□□ 1.18
CFAP54Q96N23 WWOX-218ENST00000627394 894 ntTSL 5 BASIC22.44■■□□□ 1.18
CFAP54Q96N23 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC22.44■■□□□ 1.18
CFAP54Q96N23 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC22.44■■□□□ 1.18
CFAP54Q96N23 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC22.44■■□□□ 1.18
CFAP54Q96N23 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC22.44■■□□□ 1.18
CFAP54Q96N23 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
CFAP54Q96N23 AC098590.1-201ENST00000468126 897 ntBASIC22.44■■□□□ 1.18
CFAP54Q96N23 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
CFAP54Q96N23 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC22.43■■□□□ 1.18
CFAP54Q96N23 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC22.43■■□□□ 1.18
CFAP54Q96N23 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
CFAP54Q96N23 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
CFAP54Q96N23 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
CFAP54Q96N23 REST-206ENST00000612429 1376 ntTSL 5 BASIC22.43■■□□□ 1.18
CFAP54Q96N23 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
CFAP54Q96N23 REST-207ENST00000616975 1370 ntTSL 5 BASIC22.43■■□□□ 1.18
CFAP54Q96N23 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CFAP54Q96N23 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CFAP54Q96N23 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CFAP54Q96N23 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CFAP54Q96N23 AC069152.1-201ENST00000438030 544 ntBASIC22.42■■□□□ 1.18
CFAP54Q96N23 AL138781.1-201ENST00000566567 1274 ntBASIC22.42■■□□□ 1.18
CFAP54Q96N23 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CFAP54Q96N23 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CFAP54Q96N23 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC22.42■■□□□ 1.18
CFAP54Q96N23 AP004607.4-201ENST00000530158 1459 ntBASIC22.42■■□□□ 1.18
CFAP54Q96N23 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CFAP54Q96N23 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
CFAP54Q96N23 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CFAP54Q96N23 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC22.42■■□□□ 1.18
CFAP54Q96N23 AC090877.2-201ENST00000558441 1738 ntBASIC22.42■■□□□ 1.18
CFAP54Q96N23 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CFAP54Q96N23 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CFAP54Q96N23 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CFAP54Q96N23 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CFAP54Q96N23 TPRG1LP1-201ENST00000598702 760 ntBASIC22.41■■□□□ 1.18
CFAP54Q96N23 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CFAP54Q96N23 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
CFAP54Q96N23 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CFAP54Q96N23 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CFAP54Q96N23 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
CFAP54Q96N23 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CFAP54Q96N23 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC22.4■■□□□ 1.18
CFAP54Q96N23 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CFAP54Q96N23 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CFAP54Q96N23 MIR572-201ENST00000384983 95 ntBASIC22.4■■□□□ 1.18
CFAP54Q96N23 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CFAP54Q96N23 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC22.4■■□□□ 1.18
CFAP54Q96N23 BID-214ENST00000617586 542 ntTSL 5 BASIC22.4■■□□□ 1.18
CFAP54Q96N23 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CFAP54Q96N23 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC22.39■■□□□ 1.18
CFAP54Q96N23 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CFAP54Q96N23 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
CFAP54Q96N23 AL596275.1-201ENST00000423464 877 ntBASIC22.39■■□□□ 1.17
CFAP54Q96N23 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
CFAP54Q96N23 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CFAP54Q96N23 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CFAP54Q96N23 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
CFAP54Q96N23 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC22.39■■□□□ 1.17
CFAP54Q96N23 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
CFAP54Q96N23 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC22.39■■□□□ 1.17
CFAP54Q96N23 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC22.38■■□□□ 1.17
CFAP54Q96N23 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC22.38■■□□□ 1.17
CFAP54Q96N23 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CFAP54Q96N23 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CFAP54Q96N23 AP005435.1-201ENST00000529293 1178 ntBASIC22.38■■□□□ 1.17
CFAP54Q96N23 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CFAP54Q96N23 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC22.37■■□□□ 1.17
CFAP54Q96N23 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CFAP54Q96N23 AP004609.3-201ENST00000610705 1884 ntBASIC22.37■■□□□ 1.17
CFAP54Q96N23 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CFAP54Q96N23 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
CFAP54Q96N23 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC22.37■■□□□ 1.17
CFAP54Q96N23 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
CFAP54Q96N23 SMUG1P1-201ENST00000590640 811 ntBASIC22.36■■□□□ 1.17
CFAP54Q96N23 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC22.36■■□□□ 1.17
CFAP54Q96N23 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC22.36■■□□□ 1.17
CFAP54Q96N23 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
CFAP54Q96N23 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
CFAP54Q96N23 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CFAP54Q96N23 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
CFAP54Q96N23 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
CFAP54Q96N23 FAM201B-201ENST00000458407 597 ntBASIC22.36■■□□□ 1.17
CFAP54Q96N23 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
CFAP54Q96N23 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC22.36■■□□□ 1.17
CFAP54Q96N23 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
CFAP54Q96N23 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC22.35■■□□□ 1.17
CFAP54Q96N23 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CFAP54Q96N23 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CFAP54Q96N23 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
CFAP54Q96N23 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CFAP54Q96N23 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms