Protein–RNA interactions for Protein: Q96GD3

SCMH1, Polycomb protein SCMH1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCMH1Q96GD3 DUX4L19-201ENST00000557448 1267 ntBASIC20.88■□□□□ 0.93
SCMH1Q96GD3 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SCMH1Q96GD3 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.88■□□□□ 0.93
SCMH1Q96GD3 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.88■□□□□ 0.93
SCMH1Q96GD3 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SCMH1Q96GD3 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SCMH1Q96GD3 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SCMH1Q96GD3 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SCMH1Q96GD3 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SCMH1Q96GD3 AL031432.3-201ENST00000607698 485 ntBASIC20.87■□□□□ 0.93
SCMH1Q96GD3 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SCMH1Q96GD3 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.87■□□□□ 0.93
SCMH1Q96GD3 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SCMH1Q96GD3 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SCMH1Q96GD3 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SCMH1Q96GD3 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SCMH1Q96GD3 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SCMH1Q96GD3 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SCMH1Q96GD3 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SCMH1Q96GD3 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SCMH1Q96GD3 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SCMH1Q96GD3 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.86■□□□□ 0.93
SCMH1Q96GD3 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.86■□□□□ 0.93
SCMH1Q96GD3 AC024257.2-201ENST00000549699 147 ntBASIC20.86■□□□□ 0.93
SCMH1Q96GD3 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SCMH1Q96GD3 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.86■□□□□ 0.93
SCMH1Q96GD3 AC092171.4-201ENST00000609130 632 ntBASIC20.86■□□□□ 0.93
SCMH1Q96GD3 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.86■□□□□ 0.93
SCMH1Q96GD3 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
SCMH1Q96GD3 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
SCMH1Q96GD3 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SCMH1Q96GD3 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.85■□□□□ 0.93
SCMH1Q96GD3 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SCMH1Q96GD3 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.85■□□□□ 0.93
SCMH1Q96GD3 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SCMH1Q96GD3 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SCMH1Q96GD3 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SCMH1Q96GD3 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SCMH1Q96GD3 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SCMH1Q96GD3 HLA-L-211ENST00000482052 1765 ntBASIC20.85■□□□□ 0.93
SCMH1Q96GD3 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.85■□□□□ 0.93
SCMH1Q96GD3 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.84■□□□□ 0.93
SCMH1Q96GD3 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
SCMH1Q96GD3 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.84■□□□□ 0.93
SCMH1Q96GD3 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCMH1Q96GD3 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SCMH1Q96GD3 EDA-201ENST00000338901 1233 ntBASIC20.84■□□□□ 0.93
SCMH1Q96GD3 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCMH1Q96GD3 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.84■□□□□ 0.93
SCMH1Q96GD3 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.84■□□□□ 0.93
SCMH1Q96GD3 SUDS3P1-201ENST00000505831 966 ntBASIC20.84■□□□□ 0.93
SCMH1Q96GD3 AC142381.2-201ENST00000566120 298 ntBASIC20.84■□□□□ 0.93
SCMH1Q96GD3 AC138932.3-201ENST00000567634 1902 ntBASIC20.84■□□□□ 0.93
SCMH1Q96GD3 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCMH1Q96GD3 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SCMH1Q96GD3 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCMH1Q96GD3 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SCMH1Q96GD3 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SCMH1Q96GD3 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.83■□□□□ 0.93
SCMH1Q96GD3 AC009102.2-201ENST00000606772 1639 ntBASIC20.83■□□□□ 0.93
SCMH1Q96GD3 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SCMH1Q96GD3 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SCMH1Q96GD3 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
SCMH1Q96GD3 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.83■□□□□ 0.93
SCMH1Q96GD3 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SCMH1Q96GD3 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SCMH1Q96GD3 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SCMH1Q96GD3 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.82■□□□□ 0.92
SCMH1Q96GD3 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SCMH1Q96GD3 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SCMH1Q96GD3 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.82■□□□□ 0.92
SCMH1Q96GD3 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.82■□□□□ 0.92
SCMH1Q96GD3 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.82■□□□□ 0.92
SCMH1Q96GD3 AL355001.2-201ENST00000620617 1191 ntBASIC20.82■□□□□ 0.92
SCMH1Q96GD3 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SCMH1Q96GD3 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SCMH1Q96GD3 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.82■□□□□ 0.92
SCMH1Q96GD3 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SCMH1Q96GD3 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SCMH1Q96GD3 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SCMH1Q96GD3 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.81■□□□□ 0.92
SCMH1Q96GD3 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SCMH1Q96GD3 SYT6-210ENST00000641643 1587 ntBASIC20.81■□□□□ 0.92
SCMH1Q96GD3 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
SCMH1Q96GD3 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.81■□□□□ 0.92
SCMH1Q96GD3 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SCMH1Q96GD3 CLDN5-201ENST00000403084 2357 ntBASIC20.81■□□□□ 0.92
SCMH1Q96GD3 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SCMH1Q96GD3 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.8■□□□□ 0.92
SCMH1Q96GD3 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCMH1Q96GD3 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCMH1Q96GD3 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.8■□□□□ 0.92
SCMH1Q96GD3 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCMH1Q96GD3 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCMH1Q96GD3 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SCMH1Q96GD3 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.8■□□□□ 0.92
SCMH1Q96GD3 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SCMH1Q96GD3 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCMH1Q96GD3 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SCMH1Q96GD3 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms