Protein–RNA interactions for Protein: Q96EE3

SEH1L, Nucleoporin SEH1, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1LQ96EE3 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SEH1LQ96EE3 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SEH1LQ96EE3 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SEH1LQ96EE3 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.58■□□□□ 0.73
SEH1LQ96EE3 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.58■□□□□ 0.72
SEH1LQ96EE3 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SEH1LQ96EE3 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
SEH1LQ96EE3 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SEH1LQ96EE3 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SEH1LQ96EE3 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
SEH1LQ96EE3 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.57■□□□□ 0.72
SEH1LQ96EE3 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
SEH1LQ96EE3 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.57■□□□□ 0.72
SEH1LQ96EE3 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SEH1LQ96EE3 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SEH1LQ96EE3 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
SEH1LQ96EE3 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SEH1LQ96EE3 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
SEH1LQ96EE3 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SEH1LQ96EE3 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.56■□□□□ 0.72
SEH1LQ96EE3 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SEH1LQ96EE3 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.56■□□□□ 0.72
SEH1LQ96EE3 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SEH1LQ96EE3 THA1P-201ENST00000590384 1145 ntBASIC19.56■□□□□ 0.72
SEH1LQ96EE3 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.56■□□□□ 0.72
SEH1LQ96EE3 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SEH1LQ96EE3 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SEH1LQ96EE3 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SEH1LQ96EE3 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SEH1LQ96EE3 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.56■□□□□ 0.72
SEH1LQ96EE3 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SEH1LQ96EE3 DUSP8P3-201ENST00000399571 1760 ntBASIC19.55■□□□□ 0.72
SEH1LQ96EE3 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.55■□□□□ 0.72
SEH1LQ96EE3 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.55■□□□□ 0.72
SEH1LQ96EE3 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SEH1LQ96EE3 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
SEH1LQ96EE3 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
SEH1LQ96EE3 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SEH1LQ96EE3 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.54■□□□□ 0.72
SEH1LQ96EE3 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SEH1LQ96EE3 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SEH1LQ96EE3 C1orf229-201ENST00000623686 2258 ntBASIC19.54■□□□□ 0.72
SEH1LQ96EE3 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SEH1LQ96EE3 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SEH1LQ96EE3 KRT18P24-201ENST00000344739 1156 ntBASIC19.54■□□□□ 0.72
SEH1LQ96EE3 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SEH1LQ96EE3 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SEH1LQ96EE3 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
SEH1LQ96EE3 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SEH1LQ96EE3 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SEH1LQ96EE3 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SEH1LQ96EE3 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
SEH1LQ96EE3 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SEH1LQ96EE3 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.53■□□□□ 0.72
SEH1LQ96EE3 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.53■□□□□ 0.72
SEH1LQ96EE3 AC011551.1-201ENST00000614101 683 ntBASIC19.53■□□□□ 0.72
SEH1LQ96EE3 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SEH1LQ96EE3 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SEH1LQ96EE3 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SEH1LQ96EE3 AC092068.2-201ENST00000590491 1708 ntBASIC19.53■□□□□ 0.72
SEH1LQ96EE3 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
SEH1LQ96EE3 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
SEH1LQ96EE3 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SEH1LQ96EE3 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
SEH1LQ96EE3 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
SEH1LQ96EE3 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SEH1LQ96EE3 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
SEH1LQ96EE3 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
SEH1LQ96EE3 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.52■□□□□ 0.72
SEH1LQ96EE3 MIR4281-201ENST00000580852 62 ntBASIC19.52■□□□□ 0.72
SEH1LQ96EE3 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SEH1LQ96EE3 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
SEH1LQ96EE3 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
SEH1LQ96EE3 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
SEH1LQ96EE3 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SEH1LQ96EE3 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC19.52■□□□□ 0.71
SEH1LQ96EE3 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SEH1LQ96EE3 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SEH1LQ96EE3 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.51■□□□□ 0.71
SEH1LQ96EE3 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SEH1LQ96EE3 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SEH1LQ96EE3 AL031848.2-201ENST00000607670 837 ntBASIC19.51■□□□□ 0.71
SEH1LQ96EE3 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
SEH1LQ96EE3 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
SEH1LQ96EE3 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.51■□□□□ 0.71
SEH1LQ96EE3 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SEH1LQ96EE3 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SEH1LQ96EE3 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.5■□□□□ 0.71
SEH1LQ96EE3 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SEH1LQ96EE3 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SEH1LQ96EE3 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
SEH1LQ96EE3 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SEH1LQ96EE3 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
SEH1LQ96EE3 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SEH1LQ96EE3 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SEH1LQ96EE3 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SEH1LQ96EE3 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SEH1LQ96EE3 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SEH1LQ96EE3 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SEH1LQ96EE3 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms