Protein–RNA interactions for Protein: Q96A44

SPSB4, SPRY domain-containing SOCS box protein 4, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4Q96A44 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.47■□□□□ 0.71
SPSB4Q96A44 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.47■□□□□ 0.71
SPSB4Q96A44 AC009299.2-201ENST00000482477 511 ntBASIC19.47■□□□□ 0.71
SPSB4Q96A44 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SPSB4Q96A44 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.47■□□□□ 0.71
SPSB4Q96A44 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.47■□□□□ 0.71
SPSB4Q96A44 AL451085.2-201ENST00000605085 799 ntBASIC19.47■□□□□ 0.71
SPSB4Q96A44 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.47■□□□□ 0.71
SPSB4Q96A44 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SPSB4Q96A44 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SPSB4Q96A44 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SPSB4Q96A44 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
SPSB4Q96A44 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SPSB4Q96A44 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPSB4Q96A44 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.46■□□□□ 0.71
SPSB4Q96A44 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SPSB4Q96A44 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPSB4Q96A44 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPSB4Q96A44 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SPSB4Q96A44 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPSB4Q96A44 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.46■□□□□ 0.71
SPSB4Q96A44 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
SPSB4Q96A44 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
SPSB4Q96A44 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SPSB4Q96A44 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SPSB4Q96A44 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.46■□□□□ 0.71
SPSB4Q96A44 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.45■□□□□ 0.7
SPSB4Q96A44 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPSB4Q96A44 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SPSB4Q96A44 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.45■□□□□ 0.7
SPSB4Q96A44 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.45■□□□□ 0.7
SPSB4Q96A44 MIR4787-201ENST00000607364 84 ntBASIC19.45■□□□□ 0.7
SPSB4Q96A44 AC005703.6-201ENST00000623265 1329 ntBASIC19.45■□□□□ 0.7
SPSB4Q96A44 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SPSB4Q96A44 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SPSB4Q96A44 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SPSB4Q96A44 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPSB4Q96A44 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.44■□□□□ 0.7
SPSB4Q96A44 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SPSB4Q96A44 AC068473.5-201ENST00000616428 2072 ntBASIC19.44■□□□□ 0.7
SPSB4Q96A44 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
SPSB4Q96A44 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
SPSB4Q96A44 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPSB4Q96A44 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SPSB4Q96A44 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SPSB4Q96A44 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
SPSB4Q96A44 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
SPSB4Q96A44 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPSB4Q96A44 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPSB4Q96A44 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPSB4Q96A44 AC239859.2-201ENST00000444165 318 ntBASIC19.43■□□□□ 0.7
SPSB4Q96A44 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.43■□□□□ 0.7
SPSB4Q96A44 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
SPSB4Q96A44 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SPSB4Q96A44 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SPSB4Q96A44 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
SPSB4Q96A44 AC012676.1-201ENST00000574705 1949 ntBASIC19.43■□□□□ 0.7
SPSB4Q96A44 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPSB4Q96A44 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPSB4Q96A44 AC079630.1-202ENST00000618127 1840 ntBASIC19.42■□□□□ 0.7
SPSB4Q96A44 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SPSB4Q96A44 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPSB4Q96A44 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPSB4Q96A44 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SPSB4Q96A44 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.42■□□□□ 0.7
SPSB4Q96A44 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
SPSB4Q96A44 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.41■□□□□ 0.7
SPSB4Q96A44 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SPSB4Q96A44 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPSB4Q96A44 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SPSB4Q96A44 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SPSB4Q96A44 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SPSB4Q96A44 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.41■□□□□ 0.7
SPSB4Q96A44 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SPSB4Q96A44 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SPSB4Q96A44 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SPSB4Q96A44 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPSB4Q96A44 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.41■□□□□ 0.7
SPSB4Q96A44 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPSB4Q96A44 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SPSB4Q96A44 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.41■□□□□ 0.7
SPSB4Q96A44 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPSB4Q96A44 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPSB4Q96A44 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPSB4Q96A44 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPSB4Q96A44 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.4■□□□□ 0.7
SPSB4Q96A44 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.4■□□□□ 0.7
SPSB4Q96A44 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SPSB4Q96A44 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPSB4Q96A44 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.4■□□□□ 0.7
SPSB4Q96A44 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SPSB4Q96A44 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SPSB4Q96A44 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SPSB4Q96A44 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SPSB4Q96A44 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SPSB4Q96A44 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
SPSB4Q96A44 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.39■□□□□ 0.69
SPSB4Q96A44 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.39■□□□□ 0.69
SPSB4Q96A44 MTDHP2-201ENST00000601468 714 ntBASIC19.39■□□□□ 0.69
SPSB4Q96A44 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms