Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
ATP6V0A1Q93050 LGR4-203ENST00000480977 492 ntTSL 2 BASIC25.38■■□□□ 1.65
ATP6V0A1Q93050 RARRES2P6-201ENST00000567333 442 ntBASIC25.38■■□□□ 1.65
ATP6V0A1Q93050 AC099791.2-201ENST00000605725 427 ntBASIC25.38■■□□□ 1.65
ATP6V0A1Q93050 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC25.38■■□□□ 1.65
ATP6V0A1Q93050 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC25.38■■□□□ 1.65
ATP6V0A1Q93050 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
ATP6V0A1Q93050 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC25.37■■□□□ 1.65
ATP6V0A1Q93050 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
ATP6V0A1Q93050 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC25.37■■□□□ 1.65
ATP6V0A1Q93050 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC25.37■■□□□ 1.65
ATP6V0A1Q93050 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
ATP6V0A1Q93050 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
ATP6V0A1Q93050 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
ATP6V0A1Q93050 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
ATP6V0A1Q93050 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
ATP6V0A1Q93050 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
ATP6V0A1Q93050 AC105265.2-201ENST00000467189 838 ntBASIC25.36■■□□□ 1.65
ATP6V0A1Q93050 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
ATP6V0A1Q93050 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
ATP6V0A1Q93050 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC25.35■■□□□ 1.65
ATP6V0A1Q93050 SERBP1P1-201ENST00000396021 1160 ntBASIC25.35■■□□□ 1.65
ATP6V0A1Q93050 MIR939-201ENST00000401314 82 ntBASIC25.35■■□□□ 1.65
ATP6V0A1Q93050 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
ATP6V0A1Q93050 AP001330.3-201ENST00000520123 633 ntBASIC25.35■■□□□ 1.65
ATP6V0A1Q93050 MIR4767-201ENST00000582827 78 ntBASIC25.35■■□□□ 1.65
ATP6V0A1Q93050 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
ATP6V0A1Q93050 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
ATP6V0A1Q93050 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC25.35■■□□□ 1.65
ATP6V0A1Q93050 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
ATP6V0A1Q93050 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC25.34■■□□□ 1.65
ATP6V0A1Q93050 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC25.34■■□□□ 1.65
ATP6V0A1Q93050 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
ATP6V0A1Q93050 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
ATP6V0A1Q93050 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
ATP6V0A1Q93050 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
ATP6V0A1Q93050 PTMA-205ENST00000410064 814 ntTSL 2 BASIC25.34■■□□□ 1.65
ATP6V0A1Q93050 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC25.34■■□□□ 1.65
ATP6V0A1Q93050 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
ATP6V0A1Q93050 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
ATP6V0A1Q93050 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
ATP6V0A1Q93050 EI24-213ENST00000618552 1747 ntTSL 5 BASIC25.34■■□□□ 1.65
ATP6V0A1Q93050 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
ATP6V0A1Q93050 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC25.34■■□□□ 1.65
ATP6V0A1Q93050 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
ATP6V0A1Q93050 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
ATP6V0A1Q93050 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
ATP6V0A1Q93050 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC25.33■■□□□ 1.65
ATP6V0A1Q93050 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
ATP6V0A1Q93050 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC25.33■■□□□ 1.65
ATP6V0A1Q93050 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC25.32■■□□□ 1.64
ATP6V0A1Q93050 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
ATP6V0A1Q93050 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC25.32■■□□□ 1.64
ATP6V0A1Q93050 SHD-204ENST00000599689 1729 ntTSL 5 BASIC25.32■■□□□ 1.64
ATP6V0A1Q93050 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
ATP6V0A1Q93050 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
ATP6V0A1Q93050 PTCHD3P2-201ENST00000424937 1205 ntBASIC25.32■■□□□ 1.64
ATP6V0A1Q93050 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
ATP6V0A1Q93050 C17orf82-201ENST00000623772 1530 ntBASIC25.32■■□□□ 1.64
ATP6V0A1Q93050 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
ATP6V0A1Q93050 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
ATP6V0A1Q93050 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
ATP6V0A1Q93050 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
ATP6V0A1Q93050 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC25.31■■□□□ 1.64
ATP6V0A1Q93050 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
ATP6V0A1Q93050 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC25.31■■□□□ 1.64
ATP6V0A1Q93050 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
ATP6V0A1Q93050 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
ATP6V0A1Q93050 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
ATP6V0A1Q93050 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC25.3■■□□□ 1.64
ATP6V0A1Q93050 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC25.3■■□□□ 1.64
ATP6V0A1Q93050 AC026271.2-201ENST00000428091 497 ntBASIC25.3■■□□□ 1.64
ATP6V0A1Q93050 AC091305.1-201ENST00000479476 895 ntBASIC25.3■■□□□ 1.64
ATP6V0A1Q93050 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
ATP6V0A1Q93050 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
ATP6V0A1Q93050 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
ATP6V0A1Q93050 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
ATP6V0A1Q93050 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
ATP6V0A1Q93050 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
ATP6V0A1Q93050 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
ATP6V0A1Q93050 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
ATP6V0A1Q93050 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
ATP6V0A1Q93050 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
ATP6V0A1Q93050 STOX2-205ENST00000513034 807 ntTSL 3 BASIC25.28■■□□□ 1.64
ATP6V0A1Q93050 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
ATP6V0A1Q93050 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC25.27■■□□□ 1.64
ATP6V0A1Q93050 AC004812.2-201ENST00000611079 2094 ntBASIC25.27■■□□□ 1.64
ATP6V0A1Q93050 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC25.27■■□□□ 1.64
ATP6V0A1Q93050 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
ATP6V0A1Q93050 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC25.27■■□□□ 1.64
ATP6V0A1Q93050 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
ATP6V0A1Q93050 MAG-206ENST00000597035 542 ntTSL 4 BASIC25.27■■□□□ 1.64
ATP6V0A1Q93050 AL138724.1-201ENST00000606771 1088 ntBASIC25.27■■□□□ 1.64
ATP6V0A1Q93050 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ATP6V0A1Q93050 AC011298.3-201ENST00000615796 283 ntBASIC25.27■■□□□ 1.64
ATP6V0A1Q93050 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
ATP6V0A1Q93050 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
ATP6V0A1Q93050 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
ATP6V0A1Q93050 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
ATP6V0A1Q93050 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 163 ms