Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.6■□□□□ 0.89
RNF138Q8WVD3 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF138Q8WVD3 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF138Q8WVD3 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
RNF138Q8WVD3 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
RNF138Q8WVD3 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.59■□□□□ 0.89
RNF138Q8WVD3 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
RNF138Q8WVD3 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.59■□□□□ 0.89
RNF138Q8WVD3 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF138Q8WVD3 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
RNF138Q8WVD3 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF138Q8WVD3 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RNF138Q8WVD3 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.58■□□□□ 0.89
RNF138Q8WVD3 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RNF138Q8WVD3 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
RNF138Q8WVD3 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RNF138Q8WVD3 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.58■□□□□ 0.89
RNF138Q8WVD3 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
RNF138Q8WVD3 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RNF138Q8WVD3 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.58■□□□□ 0.88
RNF138Q8WVD3 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
RNF138Q8WVD3 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF138Q8WVD3 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF138Q8WVD3 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF138Q8WVD3 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF138Q8WVD3 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.57■□□□□ 0.88
RNF138Q8WVD3 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.57■□□□□ 0.88
RNF138Q8WVD3 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF138Q8WVD3 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF138Q8WVD3 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.57■□□□□ 0.88
RNF138Q8WVD3 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RNF138Q8WVD3 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.57■□□□□ 0.88
RNF138Q8WVD3 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF138Q8WVD3 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RNF138Q8WVD3 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.57■□□□□ 0.88
RNF138Q8WVD3 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF138Q8WVD3 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
RNF138Q8WVD3 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.56■□□□□ 0.88
RNF138Q8WVD3 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.56■□□□□ 0.88
RNF138Q8WVD3 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF138Q8WVD3 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF138Q8WVD3 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.56■□□□□ 0.88
RNF138Q8WVD3 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RNF138Q8WVD3 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF138Q8WVD3 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF138Q8WVD3 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF138Q8WVD3 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
RNF138Q8WVD3 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
RNF138Q8WVD3 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.55■□□□□ 0.88
RNF138Q8WVD3 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
RNF138Q8WVD3 AC144652.1-201ENST00000609974 1624 ntBASIC20.55■□□□□ 0.88
RNF138Q8WVD3 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.55■□□□□ 0.88
RNF138Q8WVD3 FP325331.1-202ENST00000623531 1380 ntBASIC20.55■□□□□ 0.88
RNF138Q8WVD3 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.55■□□□□ 0.88
RNF138Q8WVD3 AC092068.2-201ENST00000590491 1708 ntBASIC20.55■□□□□ 0.88
RNF138Q8WVD3 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF138Q8WVD3 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF138Q8WVD3 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RNF138Q8WVD3 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF138Q8WVD3 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.54■□□□□ 0.88
RNF138Q8WVD3 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RNF138Q8WVD3 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.54■□□□□ 0.88
RNF138Q8WVD3 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.54■□□□□ 0.88
RNF138Q8WVD3 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RNF138Q8WVD3 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
RNF138Q8WVD3 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.53■□□□□ 0.88
RNF138Q8WVD3 AC079630.1-202ENST00000618127 1840 ntBASIC20.53■□□□□ 0.88
RNF138Q8WVD3 AL136116.3-201ENST00000402907 1138 ntBASIC20.53■□□□□ 0.88
RNF138Q8WVD3 SRD5A1P1-201ENST00000442297 786 ntBASIC20.53■□□□□ 0.88
RNF138Q8WVD3 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RNF138Q8WVD3 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.53■□□□□ 0.88
RNF138Q8WVD3 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.53■□□□□ 0.88
RNF138Q8WVD3 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF138Q8WVD3 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RNF138Q8WVD3 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF138Q8WVD3 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.52■□□□□ 0.88
RNF138Q8WVD3 AC241377.3-202ENST00000626088 1088 ntBASIC20.52■□□□□ 0.88
RNF138Q8WVD3 AC241585.3-202ENST00000628937 1088 ntBASIC20.52■□□□□ 0.88
RNF138Q8WVD3 AC245100.8-202ENST00000629247 1058 ntBASIC20.52■□□□□ 0.88
RNF138Q8WVD3 ANOS2P-203ENST00000472227 1816 ntBASIC20.52■□□□□ 0.88
RNF138Q8WVD3 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RNF138Q8WVD3 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.52■□□□□ 0.87
RNF138Q8WVD3 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF138Q8WVD3 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
RNF138Q8WVD3 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
RNF138Q8WVD3 AC008406.3-201ENST00000620001 1374 ntBASIC20.51■□□□□ 0.87
RNF138Q8WVD3 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF138Q8WVD3 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.51■□□□□ 0.87
RNF138Q8WVD3 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF138Q8WVD3 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RNF138Q8WVD3 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.51■□□□□ 0.87
RNF138Q8WVD3 DUX4L4-201ENST00000566884 1269 ntBASIC20.51■□□□□ 0.87
RNF138Q8WVD3 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
RNF138Q8WVD3 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.51■□□□□ 0.87
RNF138Q8WVD3 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
RNF138Q8WVD3 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RNF138Q8WVD3 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
RNF138Q8WVD3 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.5■□□□□ 0.87
RNF138Q8WVD3 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RNF138Q8WVD3 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms