Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 LSM7-203ENST00000585409 512 ntTSL 2 BASIC22.87■■□□□ 1.25
PTCD2Q8WV60 SNX5-217ENST00000606557 1087 ntBASIC22.87■■□□□ 1.25
PTCD2Q8WV60 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC22.87■■□□□ 1.25
PTCD2Q8WV60 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
PTCD2Q8WV60 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PTCD2Q8WV60 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PTCD2Q8WV60 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PTCD2Q8WV60 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PTCD2Q8WV60 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
PTCD2Q8WV60 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PTCD2Q8WV60 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PTCD2Q8WV60 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC22.86■■□□□ 1.25
PTCD2Q8WV60 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PTCD2Q8WV60 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.86■■□□□ 1.25
PTCD2Q8WV60 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC22.86■■□□□ 1.25
PTCD2Q8WV60 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PTCD2Q8WV60 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PTCD2Q8WV60 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PTCD2Q8WV60 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PTCD2Q8WV60 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PTCD2Q8WV60 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
PTCD2Q8WV60 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PTCD2Q8WV60 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PTCD2Q8WV60 MTDHP2-201ENST00000601468 714 ntBASIC22.85■■□□□ 1.25
PTCD2Q8WV60 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PTCD2Q8WV60 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PTCD2Q8WV60 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC22.85■■□□□ 1.25
PTCD2Q8WV60 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC22.85■■□□□ 1.25
PTCD2Q8WV60 AC012676.1-201ENST00000574705 1949 ntBASIC22.84■■□□□ 1.25
PTCD2Q8WV60 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PTCD2Q8WV60 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.84■■□□□ 1.25
PTCD2Q8WV60 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PTCD2Q8WV60 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
PTCD2Q8WV60 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC22.84■■□□□ 1.25
PTCD2Q8WV60 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PTCD2Q8WV60 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PTCD2Q8WV60 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
PTCD2Q8WV60 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
PTCD2Q8WV60 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
PTCD2Q8WV60 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PTCD2Q8WV60 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
PTCD2Q8WV60 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PTCD2Q8WV60 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC22.83■■□□□ 1.25
PTCD2Q8WV60 CLTA-206ENST00000466396 695 ntTSL 2 BASIC22.83■■□□□ 1.25
PTCD2Q8WV60 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC22.83■■□□□ 1.25
PTCD2Q8WV60 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PTCD2Q8WV60 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PTCD2Q8WV60 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
PTCD2Q8WV60 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
PTCD2Q8WV60 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
PTCD2Q8WV60 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
PTCD2Q8WV60 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
PTCD2Q8WV60 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PTCD2Q8WV60 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
PTCD2Q8WV60 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC22.82■■□□□ 1.24
PTCD2Q8WV60 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC22.82■■□□□ 1.24
PTCD2Q8WV60 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PTCD2Q8WV60 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PTCD2Q8WV60 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC22.81■■□□□ 1.24
PTCD2Q8WV60 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PTCD2Q8WV60 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PTCD2Q8WV60 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.81■■□□□ 1.24
PTCD2Q8WV60 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC22.81■■□□□ 1.24
PTCD2Q8WV60 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PTCD2Q8WV60 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
PTCD2Q8WV60 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PTCD2Q8WV60 AC068473.5-201ENST00000616428 2072 ntBASIC22.8■■□□□ 1.24
PTCD2Q8WV60 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC22.8■■□□□ 1.24
PTCD2Q8WV60 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.8■■□□□ 1.24
PTCD2Q8WV60 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
PTCD2Q8WV60 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
PTCD2Q8WV60 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC22.8■■□□□ 1.24
PTCD2Q8WV60 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC22.8■■□□□ 1.24
PTCD2Q8WV60 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
PTCD2Q8WV60 DUSP8P3-201ENST00000399571 1760 ntBASIC22.79■■□□□ 1.24
PTCD2Q8WV60 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
PTCD2Q8WV60 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC22.79■■□□□ 1.24
PTCD2Q8WV60 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
PTCD2Q8WV60 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
PTCD2Q8WV60 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PTCD2Q8WV60 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PTCD2Q8WV60 CD72-202ENST00000378430 585 ntTSL 3 BASIC22.79■■□□□ 1.24
PTCD2Q8WV60 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC22.79■■□□□ 1.24
PTCD2Q8WV60 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC22.79■■□□□ 1.24
PTCD2Q8WV60 AL117332.1-201ENST00000622628 974 ntBASIC22.79■■□□□ 1.24
PTCD2Q8WV60 EXOG-217ENST00000630638 197 ntTSL 5 BASIC22.79■■□□□ 1.24
PTCD2Q8WV60 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PTCD2Q8WV60 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
PTCD2Q8WV60 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
PTCD2Q8WV60 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
PTCD2Q8WV60 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC22.78■■□□□ 1.24
PTCD2Q8WV60 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC22.78■■□□□ 1.24
PTCD2Q8WV60 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC22.78■■□□□ 1.24
PTCD2Q8WV60 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC22.78■■□□□ 1.24
PTCD2Q8WV60 TRIR-202ENST00000588213 841 ntTSL 3 BASIC22.78■■□□□ 1.24
PTCD2Q8WV60 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
PTCD2Q8WV60 MIR6724-1-201ENST00000616420 92 ntBASIC22.78■■□□□ 1.24
PTCD2Q8WV60 MIR6724-2-201ENST00000616483 92 ntBASIC22.78■■□□□ 1.24
PTCD2Q8WV60 MIR6724-4-201ENST00000617390 92 ntBASIC22.78■■□□□ 1.24
PTCD2Q8WV60 MIR6724-3-201ENST00000622482 92 ntBASIC22.78■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms