Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.63■□□□□ 0.89
CNIH3Q8TBE1 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
CNIH3Q8TBE1 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNIH3Q8TBE1 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CNIH3Q8TBE1 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNIH3Q8TBE1 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CNIH3Q8TBE1 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNIH3Q8TBE1 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.62■□□□□ 0.89
CNIH3Q8TBE1 AL161729.1-201ENST00000604104 1402 ntBASIC20.62■□□□□ 0.89
CNIH3Q8TBE1 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CNIH3Q8TBE1 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CNIH3Q8TBE1 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.62■□□□□ 0.89
CNIH3Q8TBE1 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNIH3Q8TBE1 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.62■□□□□ 0.89
CNIH3Q8TBE1 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CNIH3Q8TBE1 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNIH3Q8TBE1 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CNIH3Q8TBE1 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC20.62■□□□□ 0.89
CNIH3Q8TBE1 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CNIH3Q8TBE1 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNIH3Q8TBE1 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.61■□□□□ 0.89
CNIH3Q8TBE1 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNIH3Q8TBE1 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CNIH3Q8TBE1 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNIH3Q8TBE1 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNIH3Q8TBE1 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.61■□□□□ 0.89
CNIH3Q8TBE1 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNIH3Q8TBE1 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CNIH3Q8TBE1 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNIH3Q8TBE1 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNIH3Q8TBE1 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
CNIH3Q8TBE1 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.6■□□□□ 0.89
CNIH3Q8TBE1 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.6■□□□□ 0.89
CNIH3Q8TBE1 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CNIH3Q8TBE1 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNIH3Q8TBE1 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNIH3Q8TBE1 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNIH3Q8TBE1 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.59■□□□□ 0.89
CNIH3Q8TBE1 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CNIH3Q8TBE1 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.59■□□□□ 0.89
CNIH3Q8TBE1 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNIH3Q8TBE1 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.59■□□□□ 0.89
CNIH3Q8TBE1 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CNIH3Q8TBE1 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNIH3Q8TBE1 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CNIH3Q8TBE1 AC092296.2-201ENST00000589470 999 ntBASIC20.59■□□□□ 0.89
CNIH3Q8TBE1 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.59■□□□□ 0.89
CNIH3Q8TBE1 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CNIH3Q8TBE1 ESRRAP2-201ENST00000418437 1549 ntBASIC20.58■□□□□ 0.89
CNIH3Q8TBE1 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CNIH3Q8TBE1 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CNIH3Q8TBE1 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CNIH3Q8TBE1 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC20.58■□□□□ 0.89
CNIH3Q8TBE1 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CNIH3Q8TBE1 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CNIH3Q8TBE1 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
CNIH3Q8TBE1 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CNIH3Q8TBE1 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CNIH3Q8TBE1 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.58■□□□□ 0.88
CNIH3Q8TBE1 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
CNIH3Q8TBE1 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNIH3Q8TBE1 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CNIH3Q8TBE1 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNIH3Q8TBE1 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CNIH3Q8TBE1 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNIH3Q8TBE1 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNIH3Q8TBE1 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CNIH3Q8TBE1 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
CNIH3Q8TBE1 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.57■□□□□ 0.88
CNIH3Q8TBE1 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.57■□□□□ 0.88
CNIH3Q8TBE1 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNIH3Q8TBE1 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNIH3Q8TBE1 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.57■□□□□ 0.88
CNIH3Q8TBE1 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CNIH3Q8TBE1 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CNIH3Q8TBE1 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CNIH3Q8TBE1 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.56■□□□□ 0.88
CNIH3Q8TBE1 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CNIH3Q8TBE1 KRT18P10-201ENST00000388836 1287 ntBASIC20.56■□□□□ 0.88
CNIH3Q8TBE1 MIR3648-2-201ENST00000581792 180 ntBASIC20.56■□□□□ 0.88
CNIH3Q8TBE1 MIR3648-1-201ENST00000615959 180 ntBASIC20.56■□□□□ 0.88
CNIH3Q8TBE1 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.56■□□□□ 0.88
CNIH3Q8TBE1 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.56■□□□□ 0.88
CNIH3Q8TBE1 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CNIH3Q8TBE1 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CNIH3Q8TBE1 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNIH3Q8TBE1 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNIH3Q8TBE1 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CNIH3Q8TBE1 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNIH3Q8TBE1 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.55■□□□□ 0.88
CNIH3Q8TBE1 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.55■□□□□ 0.88
CNIH3Q8TBE1 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.55■□□□□ 0.88
CNIH3Q8TBE1 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CNIH3Q8TBE1 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CNIH3Q8TBE1 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.54■□□□□ 0.88
CNIH3Q8TBE1 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CNIH3Q8TBE1 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.54■□□□□ 0.88
CNIH3Q8TBE1 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CNIH3Q8TBE1 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CNIH3Q8TBE1 AC090877.2-201ENST00000558441 1738 ntBASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms