Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.67■□□□□ 0.74
LINC01560Q8TB33 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LINC01560Q8TB33 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LINC01560Q8TB33 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.66■□□□□ 0.74
LINC01560Q8TB33 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.66■□□□□ 0.74
LINC01560Q8TB33 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.66■□□□□ 0.74
LINC01560Q8TB33 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
LINC01560Q8TB33 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LINC01560Q8TB33 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.66■□□□□ 0.74
LINC01560Q8TB33 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LINC01560Q8TB33 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LINC01560Q8TB33 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
LINC01560Q8TB33 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.65■□□□□ 0.74
LINC01560Q8TB33 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
LINC01560Q8TB33 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC19.65■□□□□ 0.74
LINC01560Q8TB33 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.65■□□□□ 0.74
LINC01560Q8TB33 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LINC01560Q8TB33 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LINC01560Q8TB33 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.65■□□□□ 0.74
LINC01560Q8TB33 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.65■□□□□ 0.74
LINC01560Q8TB33 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
LINC01560Q8TB33 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.64■□□□□ 0.73
LINC01560Q8TB33 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.64■□□□□ 0.73
LINC01560Q8TB33 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.64■□□□□ 0.73
LINC01560Q8TB33 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LINC01560Q8TB33 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC19.63■□□□□ 0.73
LINC01560Q8TB33 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LINC01560Q8TB33 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.63■□□□□ 0.73
LINC01560Q8TB33 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LINC01560Q8TB33 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.63■□□□□ 0.73
LINC01560Q8TB33 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LINC01560Q8TB33 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
LINC01560Q8TB33 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LINC01560Q8TB33 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
LINC01560Q8TB33 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.62■□□□□ 0.73
LINC01560Q8TB33 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
LINC01560Q8TB33 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LINC01560Q8TB33 AC141586.4-201ENST00000624558 1573 ntBASIC19.61■□□□□ 0.73
LINC01560Q8TB33 AC022211.4-201ENST00000625094 2161 ntBASIC19.61■□□□□ 0.73
LINC01560Q8TB33 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LINC01560Q8TB33 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
LINC01560Q8TB33 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LINC01560Q8TB33 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LINC01560Q8TB33 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LINC01560Q8TB33 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LINC01560Q8TB33 TSPY26P-201ENST00000476365 1326 ntBASIC19.61■□□□□ 0.73
LINC01560Q8TB33 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LINC01560Q8TB33 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LINC01560Q8TB33 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
LINC01560Q8TB33 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.61■□□□□ 0.73
LINC01560Q8TB33 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LINC01560Q8TB33 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LINC01560Q8TB33 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.61■□□□□ 0.73
LINC01560Q8TB33 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
LINC01560Q8TB33 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.61■□□□□ 0.73
LINC01560Q8TB33 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.61■□□□□ 0.73
LINC01560Q8TB33 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LINC01560Q8TB33 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LINC01560Q8TB33 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
LINC01560Q8TB33 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.61■□□□□ 0.73
LINC01560Q8TB33 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LINC01560Q8TB33 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
LINC01560Q8TB33 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.6■□□□□ 0.73
LINC01560Q8TB33 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.6■□□□□ 0.73
LINC01560Q8TB33 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.6■□□□□ 0.73
LINC01560Q8TB33 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.6■□□□□ 0.73
LINC01560Q8TB33 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LINC01560Q8TB33 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LINC01560Q8TB33 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.59■□□□□ 0.73
LINC01560Q8TB33 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.59■□□□□ 0.73
LINC01560Q8TB33 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.59■□□□□ 0.73
LINC01560Q8TB33 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.59■□□□□ 0.73
LINC01560Q8TB33 SLC47A1P1-202ENST00000449666 945 ntBASIC19.59■□□□□ 0.73
LINC01560Q8TB33 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.59■□□□□ 0.73
LINC01560Q8TB33 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.59■□□□□ 0.73
LINC01560Q8TB33 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.59■□□□□ 0.73
LINC01560Q8TB33 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
LINC01560Q8TB33 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LINC01560Q8TB33 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
LINC01560Q8TB33 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LINC01560Q8TB33 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
LINC01560Q8TB33 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.58■□□□□ 0.73
LINC01560Q8TB33 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LINC01560Q8TB33 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.58■□□□□ 0.72
LINC01560Q8TB33 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.58■□□□□ 0.72
LINC01560Q8TB33 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LINC01560Q8TB33 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.58■□□□□ 0.72
LINC01560Q8TB33 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LINC01560Q8TB33 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
LINC01560Q8TB33 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
LINC01560Q8TB33 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LINC01560Q8TB33 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.57■□□□□ 0.72
LINC01560Q8TB33 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LINC01560Q8TB33 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.57■□□□□ 0.72
LINC01560Q8TB33 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LINC01560Q8TB33 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
LINC01560Q8TB33 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.57■□□□□ 0.72
LINC01560Q8TB33 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.57■□□□□ 0.72
LINC01560Q8TB33 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
LINC01560Q8TB33 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms