Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF439Q8NDP4 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC18.62■□□□□ 0.57
ZNF439Q8NDP4 SNX5-217ENST00000606557 1087 ntBASIC18.62■□□□□ 0.57
ZNF439Q8NDP4 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF439Q8NDP4 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF439Q8NDP4 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF439Q8NDP4 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF439Q8NDP4 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF439Q8NDP4 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF439Q8NDP4 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC18.61■□□□□ 0.57
ZNF439Q8NDP4 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF439Q8NDP4 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.61■□□□□ 0.57
ZNF439Q8NDP4 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
ZNF439Q8NDP4 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.61■□□□□ 0.57
ZNF439Q8NDP4 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC18.61■□□□□ 0.57
ZNF439Q8NDP4 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF439Q8NDP4 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF439Q8NDP4 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF439Q8NDP4 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
ZNF439Q8NDP4 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF439Q8NDP4 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
ZNF439Q8NDP4 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF439Q8NDP4 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.6■□□□□ 0.57
ZNF439Q8NDP4 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF439Q8NDP4 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF439Q8NDP4 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
ZNF439Q8NDP4 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC18.6■□□□□ 0.57
ZNF439Q8NDP4 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.6■□□□□ 0.57
ZNF439Q8NDP4 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF439Q8NDP4 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.6■□□□□ 0.57
ZNF439Q8NDP4 PRTG-204ENST00000561292 833 ntTSL 3 BASIC18.6■□□□□ 0.57
ZNF439Q8NDP4 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC18.6■□□□□ 0.57
ZNF439Q8NDP4 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF439Q8NDP4 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF439Q8NDP4 PKD1P6-201ENST00000343738 4769 ntBASIC18.6■□□□□ 0.57
ZNF439Q8NDP4 ANOS2P-203ENST00000472227 1816 ntBASIC18.6■□□□□ 0.57
ZNF439Q8NDP4 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF439Q8NDP4 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
ZNF439Q8NDP4 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
ZNF439Q8NDP4 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.59■□□□□ 0.57
ZNF439Q8NDP4 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
ZNF439Q8NDP4 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
ZNF439Q8NDP4 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF439Q8NDP4 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
ZNF439Q8NDP4 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF439Q8NDP4 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF439Q8NDP4 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.59■□□□□ 0.57
ZNF439Q8NDP4 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.59■□□□□ 0.57
ZNF439Q8NDP4 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ZNF439Q8NDP4 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ZNF439Q8NDP4 AC021242.3-201ENST00000607598 1377 ntBASIC18.58■□□□□ 0.57
ZNF439Q8NDP4 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
ZNF439Q8NDP4 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.58■□□□□ 0.57
ZNF439Q8NDP4 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
ZNF439Q8NDP4 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.58■□□□□ 0.56
ZNF439Q8NDP4 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC18.58■□□□□ 0.56
ZNF439Q8NDP4 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.58■□□□□ 0.56
ZNF439Q8NDP4 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
ZNF439Q8NDP4 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.58■□□□□ 0.56
ZNF439Q8NDP4 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.58■□□□□ 0.56
ZNF439Q8NDP4 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF439Q8NDP4 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC18.58■□□□□ 0.56
ZNF439Q8NDP4 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF439Q8NDP4 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
ZNF439Q8NDP4 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ZNF439Q8NDP4 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.58■□□□□ 0.56
ZNF439Q8NDP4 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
ZNF439Q8NDP4 AC092068.2-201ENST00000590491 1708 ntBASIC18.57■□□□□ 0.56
ZNF439Q8NDP4 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF439Q8NDP4 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
ZNF439Q8NDP4 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF439Q8NDP4 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF439Q8NDP4 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
ZNF439Q8NDP4 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
ZNF439Q8NDP4 RARRES2P1-201ENST00000474487 481 ntBASIC18.57■□□□□ 0.56
ZNF439Q8NDP4 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.57■□□□□ 0.56
ZNF439Q8NDP4 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC18.57■□□□□ 0.56
ZNF439Q8NDP4 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.57■□□□□ 0.56
ZNF439Q8NDP4 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF439Q8NDP4 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC18.57■□□□□ 0.56
ZNF439Q8NDP4 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF439Q8NDP4 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF439Q8NDP4 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF439Q8NDP4 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF439Q8NDP4 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF439Q8NDP4 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ZNF439Q8NDP4 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF439Q8NDP4 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.56■□□□□ 0.56
ZNF439Q8NDP4 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
ZNF439Q8NDP4 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
ZNF439Q8NDP4 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.56■□□□□ 0.56
ZNF439Q8NDP4 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
ZNF439Q8NDP4 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF439Q8NDP4 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF439Q8NDP4 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF439Q8NDP4 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ZNF439Q8NDP4 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.55■□□□□ 0.56
ZNF439Q8NDP4 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF439Q8NDP4 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
ZNF439Q8NDP4 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms