Protein–RNA interactions for Protein: Q8NCS7

SLC44A5, Choline transporter-like protein 5, humanhuman

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A5Q8NCS7 EDA-201ENST00000338901 1233 ntBASIC26.72■■□□□ 1.87
SLC44A5Q8NCS7 EBPL-204ENST00000378272 766 ntTSL 3 BASIC26.72■■□□□ 1.87
SLC44A5Q8NCS7 GRAMD4P4-201ENST00000613563 1115 ntBASIC26.72■■□□□ 1.87
SLC44A5Q8NCS7 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC26.72■■□□□ 1.87
SLC44A5Q8NCS7 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
SLC44A5Q8NCS7 AC004812.2-201ENST00000611079 2094 ntBASIC26.72■■□□□ 1.87
SLC44A5Q8NCS7 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC26.71■■□□□ 1.87
SLC44A5Q8NCS7 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SLC44A5Q8NCS7 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
SLC44A5Q8NCS7 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC26.71■■□□□ 1.87
SLC44A5Q8NCS7 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SLC44A5Q8NCS7 AP001330.3-201ENST00000520123 633 ntBASIC26.71■■□□□ 1.87
SLC44A5Q8NCS7 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC26.71■■□□□ 1.87
SLC44A5Q8NCS7 AF213884.3-201ENST00000563833 479 ntBASIC26.71■■□□□ 1.87
SLC44A5Q8NCS7 AC092171.4-201ENST00000609130 632 ntBASIC26.71■■□□□ 1.87
SLC44A5Q8NCS7 AC009086.3-201ENST00000623486 1008 ntBASIC26.71■■□□□ 1.87
SLC44A5Q8NCS7 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SLC44A5Q8NCS7 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
SLC44A5Q8NCS7 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC26.7■■□□□ 1.87
SLC44A5Q8NCS7 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
SLC44A5Q8NCS7 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
SLC44A5Q8NCS7 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC26.7■■□□□ 1.86
SLC44A5Q8NCS7 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC26.7■■□□□ 1.86
SLC44A5Q8NCS7 AL355001.2-201ENST00000620617 1191 ntBASIC26.7■■□□□ 1.86
SLC44A5Q8NCS7 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
SLC44A5Q8NCS7 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
SLC44A5Q8NCS7 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
SLC44A5Q8NCS7 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SLC44A5Q8NCS7 LINC00543-201ENST00000567234 1845 ntBASIC26.69■■□□□ 1.86
SLC44A5Q8NCS7 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC26.69■■□□□ 1.86
SLC44A5Q8NCS7 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SLC44A5Q8NCS7 ASB1-202ENST00000409297 878 ntTSL 5 BASIC26.69■■□□□ 1.86
SLC44A5Q8NCS7 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SLC44A5Q8NCS7 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC26.69■■□□□ 1.86
SLC44A5Q8NCS7 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC26.69■■□□□ 1.86
SLC44A5Q8NCS7 AL136967.2-201ENST00000623968 743 ntBASIC26.69■■□□□ 1.86
SLC44A5Q8NCS7 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
SLC44A5Q8NCS7 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
SLC44A5Q8NCS7 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC26.68■■□□□ 1.86
SLC44A5Q8NCS7 MIR3181-201ENST00000578512 73 ntBASIC26.68■■□□□ 1.86
SLC44A5Q8NCS7 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC26.68■■□□□ 1.86
SLC44A5Q8NCS7 AC241377.3-202ENST00000626088 1088 ntBASIC26.68■■□□□ 1.86
SLC44A5Q8NCS7 AC241585.3-202ENST00000628937 1088 ntBASIC26.68■■□□□ 1.86
SLC44A5Q8NCS7 AC245100.8-202ENST00000629247 1058 ntBASIC26.68■■□□□ 1.86
SLC44A5Q8NCS7 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
SLC44A5Q8NCS7 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC26.68■■□□□ 1.86
SLC44A5Q8NCS7 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
SLC44A5Q8NCS7 SHD-204ENST00000599689 1729 ntTSL 5 BASIC26.68■■□□□ 1.86
SLC44A5Q8NCS7 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SLC44A5Q8NCS7 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
SLC44A5Q8NCS7 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
SLC44A5Q8NCS7 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
SLC44A5Q8NCS7 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
SLC44A5Q8NCS7 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
SLC44A5Q8NCS7 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SLC44A5Q8NCS7 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
SLC44A5Q8NCS7 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
SLC44A5Q8NCS7 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
SLC44A5Q8NCS7 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC26.66■■□□□ 1.86
SLC44A5Q8NCS7 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC26.66■■□□□ 1.86
SLC44A5Q8NCS7 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC26.66■■□□□ 1.86
SLC44A5Q8NCS7 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
SLC44A5Q8NCS7 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
SLC44A5Q8NCS7 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
SLC44A5Q8NCS7 GUK1-205ENST00000366722 850 ntTSL 3 BASIC26.66■■□□□ 1.86
SLC44A5Q8NCS7 MIR939-201ENST00000401314 82 ntBASIC26.66■■□□□ 1.86
SLC44A5Q8NCS7 MAG-206ENST00000597035 542 ntTSL 4 BASIC26.66■■□□□ 1.86
SLC44A5Q8NCS7 GTSE1-AS1-202ENST00000623117 1518 ntBASIC26.65■■□□□ 1.86
SLC44A5Q8NCS7 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
SLC44A5Q8NCS7 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
SLC44A5Q8NCS7 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SLC44A5Q8NCS7 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC26.65■■□□□ 1.86
SLC44A5Q8NCS7 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC26.65■■□□□ 1.86
SLC44A5Q8NCS7 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC26.65■■□□□ 1.86
SLC44A5Q8NCS7 AC011298.3-201ENST00000615796 283 ntBASIC26.65■■□□□ 1.86
SLC44A5Q8NCS7 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SLC44A5Q8NCS7 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC26.65■■□□□ 1.86
SLC44A5Q8NCS7 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC26.65■■□□□ 1.86
SLC44A5Q8NCS7 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC26.65■■□□□ 1.86
SLC44A5Q8NCS7 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
SLC44A5Q8NCS7 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
SLC44A5Q8NCS7 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC26.64■■□□□ 1.86
SLC44A5Q8NCS7 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
SLC44A5Q8NCS7 HES6-206ENST00000409574 738 ntTSL 2 BASIC26.64■■□□□ 1.86
SLC44A5Q8NCS7 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC26.64■■□□□ 1.86
SLC44A5Q8NCS7 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC26.64■■□□□ 1.86
SLC44A5Q8NCS7 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SLC44A5Q8NCS7 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SLC44A5Q8NCS7 PREB-202ENST00000406567 1910 ntTSL 5 BASIC26.63■■□□□ 1.85
SLC44A5Q8NCS7 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC26.63■■□□□ 1.85
SLC44A5Q8NCS7 HYI-206ENST00000372434 1025 ntTSL 5 BASIC26.63■■□□□ 1.85
SLC44A5Q8NCS7 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC26.63■■□□□ 1.85
SLC44A5Q8NCS7 AL138724.1-201ENST00000606771 1088 ntBASIC26.63■■□□□ 1.85
SLC44A5Q8NCS7 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
SLC44A5Q8NCS7 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
SLC44A5Q8NCS7 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
SLC44A5Q8NCS7 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SLC44A5Q8NCS7 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC26.62■■□□□ 1.85
SLC44A5Q8NCS7 pRNA.6-201ENST00000610482 90 ntBASIC26.62■■□□□ 1.85
SLC44A5Q8NCS7 pRNA.5-201ENST00000612139 90 ntBASIC26.62■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms