Protein–RNA interactions for Protein: Q8N9R6

CDRT4, CMT1A duplicated region transcript 4 protein, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4Q8N9R6 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDRT4Q8N9R6 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDRT4Q8N9R6 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.01■□□□□ 0.95
CDRT4Q8N9R6 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDRT4Q8N9R6 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CDRT4Q8N9R6 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21■□□□□ 0.95
CDRT4Q8N9R6 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21■□□□□ 0.95
CDRT4Q8N9R6 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21■□□□□ 0.95
CDRT4Q8N9R6 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDRT4Q8N9R6 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDRT4Q8N9R6 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21■□□□□ 0.95
CDRT4Q8N9R6 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21■□□□□ 0.95
CDRT4Q8N9R6 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21■□□□□ 0.95
CDRT4Q8N9R6 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CDRT4Q8N9R6 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDRT4Q8N9R6 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CDRT4Q8N9R6 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CDRT4Q8N9R6 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CDRT4Q8N9R6 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CDRT4Q8N9R6 AL035685.1-201ENST00000636663 812 ntBASIC20.99■□□□□ 0.95
CDRT4Q8N9R6 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.99■□□□□ 0.95
CDRT4Q8N9R6 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDRT4Q8N9R6 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CDRT4Q8N9R6 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDRT4Q8N9R6 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.99■□□□□ 0.95
CDRT4Q8N9R6 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDRT4Q8N9R6 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDRT4Q8N9R6 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDRT4Q8N9R6 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.98■□□□□ 0.95
CDRT4Q8N9R6 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDRT4Q8N9R6 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDRT4Q8N9R6 TSPY9P-201ENST00000440215 945 ntBASIC20.98■□□□□ 0.95
CDRT4Q8N9R6 TSPY11P-201ENST00000442607 1045 ntBASIC20.98■□□□□ 0.95
CDRT4Q8N9R6 AC010997.5-201ENST00000609182 354 ntBASIC20.98■□□□□ 0.95
CDRT4Q8N9R6 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.98■□□□□ 0.95
CDRT4Q8N9R6 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDRT4Q8N9R6 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDRT4Q8N9R6 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CDRT4Q8N9R6 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDRT4Q8N9R6 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.97■□□□□ 0.95
CDRT4Q8N9R6 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDRT4Q8N9R6 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDRT4Q8N9R6 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.97■□□□□ 0.95
CDRT4Q8N9R6 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.97■□□□□ 0.95
CDRT4Q8N9R6 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
CDRT4Q8N9R6 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDRT4Q8N9R6 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDRT4Q8N9R6 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CDRT4Q8N9R6 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDRT4Q8N9R6 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CDRT4Q8N9R6 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDRT4Q8N9R6 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDRT4Q8N9R6 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
CDRT4Q8N9R6 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDRT4Q8N9R6 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDRT4Q8N9R6 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.96■□□□□ 0.95
CDRT4Q8N9R6 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDRT4Q8N9R6 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDRT4Q8N9R6 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CDRT4Q8N9R6 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.95
CDRT4Q8N9R6 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDRT4Q8N9R6 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDRT4Q8N9R6 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDRT4Q8N9R6 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.95■□□□□ 0.94
CDRT4Q8N9R6 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDRT4Q8N9R6 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.95■□□□□ 0.94
CDRT4Q8N9R6 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.95■□□□□ 0.94
CDRT4Q8N9R6 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDRT4Q8N9R6 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.95■□□□□ 0.94
CDRT4Q8N9R6 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CDRT4Q8N9R6 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDRT4Q8N9R6 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDRT4Q8N9R6 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
CDRT4Q8N9R6 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.94■□□□□ 0.94
CDRT4Q8N9R6 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDRT4Q8N9R6 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDRT4Q8N9R6 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDRT4Q8N9R6 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDRT4Q8N9R6 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.94■□□□□ 0.94
CDRT4Q8N9R6 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.94■□□□□ 0.94
CDRT4Q8N9R6 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDRT4Q8N9R6 DUSP8P3-201ENST00000399571 1760 ntBASIC20.94■□□□□ 0.94
CDRT4Q8N9R6 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDRT4Q8N9R6 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDRT4Q8N9R6 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CDRT4Q8N9R6 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDRT4Q8N9R6 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.94■□□□□ 0.94
CDRT4Q8N9R6 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDRT4Q8N9R6 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDRT4Q8N9R6 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDRT4Q8N9R6 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDRT4Q8N9R6 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDRT4Q8N9R6 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
CDRT4Q8N9R6 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.93■□□□□ 0.94
CDRT4Q8N9R6 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDRT4Q8N9R6 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CDRT4Q8N9R6 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.93■□□□□ 0.94
CDRT4Q8N9R6 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CDRT4Q8N9R6 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CDRT4Q8N9R6 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms