Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC22.04■■□□□ 1.12
CPSF7Q8N684 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CPSF7Q8N684 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CPSF7Q8N684 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
CPSF7Q8N684 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CPSF7Q8N684 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
CPSF7Q8N684 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CPSF7Q8N684 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CPSF7Q8N684 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CPSF7Q8N684 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC22.03■■□□□ 1.12
CPSF7Q8N684 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC22.03■■□□□ 1.12
CPSF7Q8N684 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
CPSF7Q8N684 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.03■■□□□ 1.12
CPSF7Q8N684 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CPSF7Q8N684 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.03■■□□□ 1.12
CPSF7Q8N684 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CPSF7Q8N684 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC22.02■■□□□ 1.12
CPSF7Q8N684 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
CPSF7Q8N684 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
CPSF7Q8N684 LSR-203ENST00000360798 1963 ntTSL 2 BASIC22.02■■□□□ 1.12
CPSF7Q8N684 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
CPSF7Q8N684 MTX2-204ENST00000443241 799 ntTSL 3 BASIC22.02■■□□□ 1.12
CPSF7Q8N684 RPS2P7-201ENST00000447334 885 ntBASIC22.02■■□□□ 1.12
CPSF7Q8N684 MIR4508-201ENST00000584178 70 ntBASIC22.02■■□□□ 1.12
CPSF7Q8N684 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC22.02■■□□□ 1.12
CPSF7Q8N684 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
CPSF7Q8N684 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
CPSF7Q8N684 AC090877.2-201ENST00000558441 1738 ntBASIC22.02■■□□□ 1.12
CPSF7Q8N684 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CPSF7Q8N684 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
CPSF7Q8N684 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.11
CPSF7Q8N684 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CPSF7Q8N684 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CPSF7Q8N684 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC22.01■■□□□ 1.11
CPSF7Q8N684 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CPSF7Q8N684 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CPSF7Q8N684 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CPSF7Q8N684 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
CPSF7Q8N684 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC22.01■■□□□ 1.11
CPSF7Q8N684 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
CPSF7Q8N684 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CPSF7Q8N684 TERT-206ENST00000508104 2486 ntTSL 5 BASIC22■■□□□ 1.11
CPSF7Q8N684 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC22■■□□□ 1.11
CPSF7Q8N684 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
CPSF7Q8N684 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
CPSF7Q8N684 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC22■■□□□ 1.11
CPSF7Q8N684 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CPSF7Q8N684 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC22■■□□□ 1.11
CPSF7Q8N684 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC22■■□□□ 1.11
CPSF7Q8N684 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CPSF7Q8N684 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
CPSF7Q8N684 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
CPSF7Q8N684 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC22■■□□□ 1.11
CPSF7Q8N684 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC22■■□□□ 1.11
CPSF7Q8N684 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
CPSF7Q8N684 AC137767.1-201ENST00000602918 1920 ntBASIC22■■□□□ 1.11
CPSF7Q8N684 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC22■■□□□ 1.11
CPSF7Q8N684 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CPSF7Q8N684 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
CPSF7Q8N684 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CPSF7Q8N684 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CPSF7Q8N684 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.99■■□□□ 1.11
CPSF7Q8N684 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.99■■□□□ 1.11
CPSF7Q8N684 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CPSF7Q8N684 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.99■■□□□ 1.11
CPSF7Q8N684 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.99■■□□□ 1.11
CPSF7Q8N684 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CPSF7Q8N684 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CPSF7Q8N684 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.98■■□□□ 1.11
CPSF7Q8N684 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
CPSF7Q8N684 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.98■■□□□ 1.11
CPSF7Q8N684 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CPSF7Q8N684 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.98■■□□□ 1.11
CPSF7Q8N684 AC009299.2-201ENST00000482477 511 ntBASIC21.98■■□□□ 1.11
CPSF7Q8N684 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CPSF7Q8N684 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CPSF7Q8N684 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
CPSF7Q8N684 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CPSF7Q8N684 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CPSF7Q8N684 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CPSF7Q8N684 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.98■■□□□ 1.11
CPSF7Q8N684 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CPSF7Q8N684 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
CPSF7Q8N684 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CPSF7Q8N684 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CPSF7Q8N684 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CPSF7Q8N684 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.97■■□□□ 1.11
CPSF7Q8N684 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
CPSF7Q8N684 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CPSF7Q8N684 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
CPSF7Q8N684 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CPSF7Q8N684 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
CPSF7Q8N684 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CPSF7Q8N684 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CPSF7Q8N684 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CPSF7Q8N684 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CPSF7Q8N684 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CPSF7Q8N684 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CPSF7Q8N684 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.96■■□□□ 1.11
CPSF7Q8N684 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms