Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
TTC39CQ8N584 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
TTC39CQ8N584 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
TTC39CQ8N584 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
TTC39CQ8N584 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
TTC39CQ8N584 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
TTC39CQ8N584 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
TTC39CQ8N584 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
TTC39CQ8N584 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
TTC39CQ8N584 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
TTC39CQ8N584 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
TTC39CQ8N584 THRA-202ENST00000394121 2260 ntTSL 2 BASIC24.04■■□□□ 1.44
TTC39CQ8N584 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
TTC39CQ8N584 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TTC39CQ8N584 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TTC39CQ8N584 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TTC39CQ8N584 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
TTC39CQ8N584 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TTC39CQ8N584 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TTC39CQ8N584 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC24.03■■□□□ 1.44
TTC39CQ8N584 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC24.03■■□□□ 1.44
TTC39CQ8N584 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
TTC39CQ8N584 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TTC39CQ8N584 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC24.03■■□□□ 1.44
TTC39CQ8N584 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC24.03■■□□□ 1.44
TTC39CQ8N584 FP325331.1-202ENST00000623531 1380 ntBASIC24.03■■□□□ 1.44
TTC39CQ8N584 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
TTC39CQ8N584 C17orf82-201ENST00000623772 1530 ntBASIC24.02■■□□□ 1.44
TTC39CQ8N584 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC24.02■■□□□ 1.44
TTC39CQ8N584 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC24.02■■□□□ 1.44
TTC39CQ8N584 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
TTC39CQ8N584 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
TTC39CQ8N584 AC131212.1-201ENST00000613771 668 ntBASIC24.02■■□□□ 1.44
TTC39CQ8N584 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
TTC39CQ8N584 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC24.02■■□□□ 1.44
TTC39CQ8N584 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
TTC39CQ8N584 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.43
TTC39CQ8N584 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TTC39CQ8N584 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TTC39CQ8N584 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TTC39CQ8N584 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
TTC39CQ8N584 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
TTC39CQ8N584 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC24.01■■□□□ 1.43
TTC39CQ8N584 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TTC39CQ8N584 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
TTC39CQ8N584 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC24■■□□□ 1.43
TTC39CQ8N584 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
TTC39CQ8N584 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
TTC39CQ8N584 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC24■■□□□ 1.43
TTC39CQ8N584 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC24■■□□□ 1.43
TTC39CQ8N584 AL512631.2-201ENST00000604634 923 ntBASIC24■■□□□ 1.43
TTC39CQ8N584 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
TTC39CQ8N584 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
TTC39CQ8N584 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
TTC39CQ8N584 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TTC39CQ8N584 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC23.99■■□□□ 1.43
TTC39CQ8N584 AC144652.1-201ENST00000609974 1624 ntBASIC23.99■■□□□ 1.43
TTC39CQ8N584 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TTC39CQ8N584 AC092068.2-201ENST00000590491 1708 ntBASIC23.99■■□□□ 1.43
TTC39CQ8N584 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TTC39CQ8N584 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TTC39CQ8N584 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
TTC39CQ8N584 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC23.99■■□□□ 1.43
TTC39CQ8N584 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TTC39CQ8N584 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
TTC39CQ8N584 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TTC39CQ8N584 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
TTC39CQ8N584 AC241377.3-202ENST00000626088 1088 ntBASIC23.98■■□□□ 1.43
TTC39CQ8N584 AC241585.3-202ENST00000628937 1088 ntBASIC23.98■■□□□ 1.43
TTC39CQ8N584 AC245100.8-202ENST00000629247 1058 ntBASIC23.98■■□□□ 1.43
TTC39CQ8N584 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TTC39CQ8N584 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.98■■□□□ 1.43
TTC39CQ8N584 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TTC39CQ8N584 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
TTC39CQ8N584 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TTC39CQ8N584 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
TTC39CQ8N584 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TTC39CQ8N584 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
TTC39CQ8N584 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
TTC39CQ8N584 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.97■■□□□ 1.43
TTC39CQ8N584 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TTC39CQ8N584 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC23.97■■□□□ 1.43
TTC39CQ8N584 ANOS2P-203ENST00000472227 1816 ntBASIC23.97■■□□□ 1.43
TTC39CQ8N584 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.97■■□□□ 1.43
TTC39CQ8N584 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.97■■□□□ 1.43
TTC39CQ8N584 GATM-206ENST00000558336 1522 ntTSL 2 BASIC23.97■■□□□ 1.43
TTC39CQ8N584 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
TTC39CQ8N584 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TTC39CQ8N584 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
TTC39CQ8N584 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TTC39CQ8N584 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
TTC39CQ8N584 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC23.96■■□□□ 1.43
TTC39CQ8N584 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.96■■□□□ 1.43
TTC39CQ8N584 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TTC39CQ8N584 SRD5A1P1-201ENST00000442297 786 ntBASIC23.96■■□□□ 1.43
TTC39CQ8N584 QDPR-206ENST00000508623 601 ntTSL 3 BASIC23.96■■□□□ 1.43
TTC39CQ8N584 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.96■■□□□ 1.43
TTC39CQ8N584 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TTC39CQ8N584 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC23.96■■□□□ 1.43
TTC39CQ8N584 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms