Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 MIR6821-201ENST00000617625 74 ntBASIC31.74■■■□□ 2.67
ARHGEF28Q8N1W1 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
ARHGEF28Q8N1W1 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
ARHGEF28Q8N1W1 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
ARHGEF28Q8N1W1 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
ARHGEF28Q8N1W1 MED17-227ENST00000640521 2047 ntTSL 5 BASIC31.73■■■□□ 2.67
ARHGEF28Q8N1W1 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC31.73■■■□□ 2.67
ARHGEF28Q8N1W1 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
ARHGEF28Q8N1W1 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
ARHGEF28Q8N1W1 AC104564.3-201ENST00000582367 638 ntBASIC31.73■■■□□ 2.67
ARHGEF28Q8N1W1 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC31.73■■■□□ 2.67
ARHGEF28Q8N1W1 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC31.73■■■□□ 2.67
ARHGEF28Q8N1W1 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC31.73■■■□□ 2.67
ARHGEF28Q8N1W1 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
ARHGEF28Q8N1W1 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
ARHGEF28Q8N1W1 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC31.72■■■□□ 2.67
ARHGEF28Q8N1W1 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
ARHGEF28Q8N1W1 MIR5787-201ENST00000611784 55 ntBASIC31.72■■■□□ 2.67
ARHGEF28Q8N1W1 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC31.71■■■□□ 2.67
ARHGEF28Q8N1W1 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC31.71■■■□□ 2.67
ARHGEF28Q8N1W1 SHF-207ENST00000560540 2062 ntTSL 5 BASIC31.71■■■□□ 2.67
ARHGEF28Q8N1W1 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC31.71■■■□□ 2.67
ARHGEF28Q8N1W1 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC31.71■■■□□ 2.67
ARHGEF28Q8N1W1 AC087623.3-201ENST00000607047 1098 ntBASIC31.71■■■□□ 2.67
ARHGEF28Q8N1W1 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
ARHGEF28Q8N1W1 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
ARHGEF28Q8N1W1 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC31.7■■■□□ 2.67
ARHGEF28Q8N1W1 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
ARHGEF28Q8N1W1 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC31.7■■■□□ 2.67
ARHGEF28Q8N1W1 PLD4-205ENST00000553861 667 ntTSL 2 BASIC31.7■■■□□ 2.67
ARHGEF28Q8N1W1 AC233992.3-201ENST00000607491 485 ntBASIC31.7■■■□□ 2.67
ARHGEF28Q8N1W1 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
ARHGEF28Q8N1W1 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC31.7■■■□□ 2.67
ARHGEF28Q8N1W1 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
ARHGEF28Q8N1W1 AC142381.3-201ENST00000568208 1670 ntBASIC31.69■■■□□ 2.66
ARHGEF28Q8N1W1 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC31.69■■■□□ 2.66
ARHGEF28Q8N1W1 EI24-213ENST00000618552 1747 ntTSL 5 BASIC31.69■■■□□ 2.66
ARHGEF28Q8N1W1 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC31.69■■■□□ 2.66
ARHGEF28Q8N1W1 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC31.68■■■□□ 2.66
ARHGEF28Q8N1W1 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC31.68■■■□□ 2.66
ARHGEF28Q8N1W1 pRNA.6-201ENST00000610482 90 ntBASIC31.68■■■□□ 2.66
ARHGEF28Q8N1W1 pRNA.5-201ENST00000612139 90 ntBASIC31.68■■■□□ 2.66
ARHGEF28Q8N1W1 pRNA.11-201ENST00000618423 90 ntBASIC31.68■■■□□ 2.66
ARHGEF28Q8N1W1 pRNA.13-201ENST00000619112 90 ntBASIC31.68■■■□□ 2.66
ARHGEF28Q8N1W1 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC31.68■■■□□ 2.66
ARHGEF28Q8N1W1 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
ARHGEF28Q8N1W1 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC31.67■■■□□ 2.66
ARHGEF28Q8N1W1 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC31.67■■■□□ 2.66
ARHGEF28Q8N1W1 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
ARHGEF28Q8N1W1 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC31.66■■■□□ 2.66
ARHGEF28Q8N1W1 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC31.66■■■□□ 2.66
ARHGEF28Q8N1W1 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC31.66■■■□□ 2.66
ARHGEF28Q8N1W1 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC31.66■■■□□ 2.66
ARHGEF28Q8N1W1 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC31.66■■■□□ 2.66
ARHGEF28Q8N1W1 ANKRD20A6P-201ENST00000618763 204 ntBASIC31.66■■■□□ 2.66
ARHGEF28Q8N1W1 MPST-208ENST00000628507 698 ntTSL 5 BASIC31.66■■■□□ 2.66
ARHGEF28Q8N1W1 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
ARHGEF28Q8N1W1 AC141586.4-201ENST00000624558 1573 ntBASIC31.65■■■□□ 2.66
ARHGEF28Q8N1W1 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
ARHGEF28Q8N1W1 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC31.65■■■□□ 2.66
ARHGEF28Q8N1W1 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
ARHGEF28Q8N1W1 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC31.65■■■□□ 2.66
ARHGEF28Q8N1W1 JTB-203ENST00000368589 1216 ntTSL 2 BASIC31.65■■■□□ 2.66
ARHGEF28Q8N1W1 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC31.65■■■□□ 2.66
ARHGEF28Q8N1W1 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC31.65■■■□□ 2.66
ARHGEF28Q8N1W1 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC31.64■■■□□ 2.66
ARHGEF28Q8N1W1 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
ARHGEF28Q8N1W1 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC31.64■■■□□ 2.66
ARHGEF28Q8N1W1 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC31.64■■■□□ 2.66
ARHGEF28Q8N1W1 TMEM202-AS1-202ENST00000565181 2325 ntBASIC31.64■■■□□ 2.66
ARHGEF28Q8N1W1 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC31.64■■■□□ 2.66
ARHGEF28Q8N1W1 IRS3P-201ENST00000223076 1006 ntBASIC31.63■■■□□ 2.65
ARHGEF28Q8N1W1 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
ARHGEF28Q8N1W1 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
ARHGEF28Q8N1W1 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC31.63■■■□□ 2.65
ARHGEF28Q8N1W1 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
ARHGEF28Q8N1W1 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
ARHGEF28Q8N1W1 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC31.63■■■□□ 2.65
ARHGEF28Q8N1W1 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
ARHGEF28Q8N1W1 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC31.63■■■□□ 2.65
ARHGEF28Q8N1W1 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC31.63■■■□□ 2.65
ARHGEF28Q8N1W1 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
ARHGEF28Q8N1W1 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC31.62■■■□□ 2.65
ARHGEF28Q8N1W1 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
ARHGEF28Q8N1W1 HACD1-201ENST00000326961 773 ntTSL 2 BASIC31.62■■■□□ 2.65
ARHGEF28Q8N1W1 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC31.62■■■□□ 2.65
ARHGEF28Q8N1W1 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
ARHGEF28Q8N1W1 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC31.61■■■□□ 2.65
ARHGEF28Q8N1W1 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
ARHGEF28Q8N1W1 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC31.61■■■□□ 2.65
ARHGEF28Q8N1W1 AL031602.1-201ENST00000633169 911 ntBASIC31.61■■■□□ 2.65
ARHGEF28Q8N1W1 AC135731.1-201ENST00000569415 2548 ntBASIC31.61■■■□□ 2.65
ARHGEF28Q8N1W1 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC31.61■■■□□ 2.65
ARHGEF28Q8N1W1 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC31.61■■■□□ 2.65
ARHGEF28Q8N1W1 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
ARHGEF28Q8N1W1 EED-207ENST00000528180 1745 ntTSL 5 BASIC31.61■■■□□ 2.65
ARHGEF28Q8N1W1 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
ARHGEF28Q8N1W1 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC31.61■■■□□ 2.65
ARHGEF28Q8N1W1 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC31.61■■■□□ 2.65
ARHGEF28Q8N1W1 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC31.61■■■□□ 2.65
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms