Protein–RNA interactions for Protein: Q8IXL7

MSRB3, Methionine-R-sulfoxide reductase B3, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3Q8IXL7 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
MSRB3Q8IXL7 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.33■■□□□ 1.01
MSRB3Q8IXL7 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.33■■□□□ 1.01
MSRB3Q8IXL7 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
MSRB3Q8IXL7 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.33■■□□□ 1
MSRB3Q8IXL7 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
MSRB3Q8IXL7 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.32■■□□□ 1
MSRB3Q8IXL7 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.32■■□□□ 1
MSRB3Q8IXL7 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.32■■□□□ 1
MSRB3Q8IXL7 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21.32■■□□□ 1
MSRB3Q8IXL7 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
MSRB3Q8IXL7 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
MSRB3Q8IXL7 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MSRB3Q8IXL7 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.31■■□□□ 1
MSRB3Q8IXL7 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.31■■□□□ 1
MSRB3Q8IXL7 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.31■■□□□ 1
MSRB3Q8IXL7 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
MSRB3Q8IXL7 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.31■■□□□ 1
MSRB3Q8IXL7 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
MSRB3Q8IXL7 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.31■■□□□ 1
MSRB3Q8IXL7 AC022616.5-201ENST00000518796 181 ntBASIC21.31■■□□□ 1
MSRB3Q8IXL7 DUX4L18-201ENST00000553347 1267 ntBASIC21.31■■□□□ 1
MSRB3Q8IXL7 AF131216.4-201ENST00000638924 1588 ntBASIC21.31■■□□□ 1
MSRB3Q8IXL7 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
MSRB3Q8IXL7 ECEL1P1-201ENST00000373592 1742 ntBASIC21.3■■□□□ 1
MSRB3Q8IXL7 AC079630.1-202ENST00000618127 1840 ntBASIC21.3■■□□□ 1
MSRB3Q8IXL7 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
MSRB3Q8IXL7 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.3■■□□□ 1
MSRB3Q8IXL7 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
MSRB3Q8IXL7 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
MSRB3Q8IXL7 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
MSRB3Q8IXL7 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.29■■□□□ 1
MSRB3Q8IXL7 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MSRB3Q8IXL7 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
MSRB3Q8IXL7 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
MSRB3Q8IXL7 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
MSRB3Q8IXL7 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.29■■□□□ 1
MSRB3Q8IXL7 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MSRB3Q8IXL7 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.29■■□□□ 1
MSRB3Q8IXL7 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.29■■□□□ 1
MSRB3Q8IXL7 AC120024.1-201ENST00000562672 995 ntBASIC21.29■■□□□ 1
MSRB3Q8IXL7 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.29■■□□□ 1
MSRB3Q8IXL7 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.29■■□□□ 1
MSRB3Q8IXL7 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
MSRB3Q8IXL7 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.29■■□□□ 1
MSRB3Q8IXL7 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.28■■□□□ 1
MSRB3Q8IXL7 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.28■■□□□ 1
MSRB3Q8IXL7 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MSRB3Q8IXL7 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MSRB3Q8IXL7 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MSRB3Q8IXL7 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.28■■□□□ 1
MSRB3Q8IXL7 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
MSRB3Q8IXL7 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.28■■□□□ 1
MSRB3Q8IXL7 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
MSRB3Q8IXL7 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.28■■□□□ 1
MSRB3Q8IXL7 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
MSRB3Q8IXL7 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.27■■□□□ 1
MSRB3Q8IXL7 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
MSRB3Q8IXL7 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
MSRB3Q8IXL7 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
MSRB3Q8IXL7 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
MSRB3Q8IXL7 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
MSRB3Q8IXL7 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.27■□□□□ 0.99
MSRB3Q8IXL7 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
MSRB3Q8IXL7 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MSRB3Q8IXL7 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
MSRB3Q8IXL7 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
MSRB3Q8IXL7 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MSRB3Q8IXL7 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MSRB3Q8IXL7 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.26■□□□□ 0.99
MSRB3Q8IXL7 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.26■□□□□ 0.99
MSRB3Q8IXL7 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MSRB3Q8IXL7 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
MSRB3Q8IXL7 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.26■□□□□ 0.99
MSRB3Q8IXL7 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
MSRB3Q8IXL7 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.26■□□□□ 0.99
MSRB3Q8IXL7 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MSRB3Q8IXL7 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
MSRB3Q8IXL7 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MSRB3Q8IXL7 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
MSRB3Q8IXL7 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
MSRB3Q8IXL7 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
MSRB3Q8IXL7 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
MSRB3Q8IXL7 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.25■□□□□ 0.99
MSRB3Q8IXL7 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.25■□□□□ 0.99
MSRB3Q8IXL7 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MSRB3Q8IXL7 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.25■□□□□ 0.99
MSRB3Q8IXL7 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MSRB3Q8IXL7 AC139795.1-202ENST00000500444 432 ntBASIC21.25■□□□□ 0.99
MSRB3Q8IXL7 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
MSRB3Q8IXL7 PVT1_1.1-201ENST00000615125 194 ntBASIC21.25■□□□□ 0.99
MSRB3Q8IXL7 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.25■□□□□ 0.99
MSRB3Q8IXL7 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.25■□□□□ 0.99
MSRB3Q8IXL7 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MSRB3Q8IXL7 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
MSRB3Q8IXL7 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MSRB3Q8IXL7 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.24■□□□□ 0.99
MSRB3Q8IXL7 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MSRB3Q8IXL7 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.24■□□□□ 0.99
MSRB3Q8IXL7 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms