Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC24.46■■□□□ 1.51
NPAS4Q8IUM7 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC24.46■■□□□ 1.51
NPAS4Q8IUM7 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
NPAS4Q8IUM7 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
NPAS4Q8IUM7 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
NPAS4Q8IUM7 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC24.46■■□□□ 1.51
NPAS4Q8IUM7 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
NPAS4Q8IUM7 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC24.45■■□□□ 1.5
NPAS4Q8IUM7 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
NPAS4Q8IUM7 TSPY26P-201ENST00000476365 1326 ntBASIC24.45■■□□□ 1.5
NPAS4Q8IUM7 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC24.45■■□□□ 1.5
NPAS4Q8IUM7 AC034268.1-201ENST00000441047 882 ntBASIC24.45■■□□□ 1.5
NPAS4Q8IUM7 SLC47A1P1-202ENST00000449666 945 ntBASIC24.45■■□□□ 1.5
NPAS4Q8IUM7 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
NPAS4Q8IUM7 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC24.44■■□□□ 1.5
NPAS4Q8IUM7 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC24.44■■□□□ 1.5
NPAS4Q8IUM7 EI24-204ENST00000527235 1625 ntTSL 5 BASIC24.44■■□□□ 1.5
NPAS4Q8IUM7 YBX1P1-201ENST00000445822 960 ntBASIC24.44■■□□□ 1.5
NPAS4Q8IUM7 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC24.44■■□□□ 1.5
NPAS4Q8IUM7 AICDA-202ENST00000537228 667 ntTSL 5 BASIC24.44■■□□□ 1.5
NPAS4Q8IUM7 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC24.44■■□□□ 1.5
NPAS4Q8IUM7 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
NPAS4Q8IUM7 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
NPAS4Q8IUM7 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
NPAS4Q8IUM7 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC24.43■■□□□ 1.5
NPAS4Q8IUM7 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC24.43■■□□□ 1.5
NPAS4Q8IUM7 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
NPAS4Q8IUM7 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
NPAS4Q8IUM7 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC24.43■■□□□ 1.5
NPAS4Q8IUM7 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
NPAS4Q8IUM7 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
NPAS4Q8IUM7 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC24.42■■□□□ 1.5
NPAS4Q8IUM7 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
NPAS4Q8IUM7 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
NPAS4Q8IUM7 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
NPAS4Q8IUM7 NME4-202ENST00000382940 766 ntTSL 3 BASIC24.42■■□□□ 1.5
NPAS4Q8IUM7 ASB1-202ENST00000409297 878 ntTSL 5 BASIC24.42■■□□□ 1.5
NPAS4Q8IUM7 NME4-211ENST00000620944 1193 ntTSL 2 BASIC24.42■■□□□ 1.5
NPAS4Q8IUM7 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC24.42■■□□□ 1.5
NPAS4Q8IUM7 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
NPAS4Q8IUM7 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC24.42■■□□□ 1.5
NPAS4Q8IUM7 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
NPAS4Q8IUM7 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
NPAS4Q8IUM7 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
NPAS4Q8IUM7 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
NPAS4Q8IUM7 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
NPAS4Q8IUM7 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
NPAS4Q8IUM7 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
NPAS4Q8IUM7 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC24.41■■□□□ 1.5
NPAS4Q8IUM7 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC24.41■■□□□ 1.5
NPAS4Q8IUM7 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC24.41■■□□□ 1.5
NPAS4Q8IUM7 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC24.41■■□□□ 1.5
NPAS4Q8IUM7 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
NPAS4Q8IUM7 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.41■■□□□ 1.5
NPAS4Q8IUM7 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC24.4■■□□□ 1.5
NPAS4Q8IUM7 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC24.4■■□□□ 1.5
NPAS4Q8IUM7 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
NPAS4Q8IUM7 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC24.4■■□□□ 1.5
NPAS4Q8IUM7 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC24.4■■□□□ 1.5
NPAS4Q8IUM7 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC24.4■■□□□ 1.5
NPAS4Q8IUM7 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
NPAS4Q8IUM7 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
NPAS4Q8IUM7 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
NPAS4Q8IUM7 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC24.39■■□□□ 1.5
NPAS4Q8IUM7 IGHV3-19-201ENST00000521488 291 ntBASIC24.39■■□□□ 1.49
NPAS4Q8IUM7 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC24.39■■□□□ 1.49
NPAS4Q8IUM7 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC24.39■■□□□ 1.49
NPAS4Q8IUM7 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
NPAS4Q8IUM7 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC24.38■■□□□ 1.49
NPAS4Q8IUM7 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC24.38■■□□□ 1.49
NPAS4Q8IUM7 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC24.38■■□□□ 1.49
NPAS4Q8IUM7 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
NPAS4Q8IUM7 HACD1-201ENST00000326961 773 ntTSL 2 BASIC24.38■■□□□ 1.49
NPAS4Q8IUM7 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC24.38■■□□□ 1.49
NPAS4Q8IUM7 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC24.38■■□□□ 1.49
NPAS4Q8IUM7 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC24.38■■□□□ 1.49
NPAS4Q8IUM7 AL358852.1-201ENST00000623174 1268 ntBASIC24.38■■□□□ 1.49
NPAS4Q8IUM7 AL031602.1-201ENST00000633169 911 ntBASIC24.38■■□□□ 1.49
NPAS4Q8IUM7 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
NPAS4Q8IUM7 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
NPAS4Q8IUM7 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
NPAS4Q8IUM7 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
NPAS4Q8IUM7 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
NPAS4Q8IUM7 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC24.37■■□□□ 1.49
NPAS4Q8IUM7 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC24.37■■□□□ 1.49
NPAS4Q8IUM7 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC24.37■■□□□ 1.49
NPAS4Q8IUM7 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
NPAS4Q8IUM7 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC24.36■■□□□ 1.49
NPAS4Q8IUM7 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
NPAS4Q8IUM7 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
NPAS4Q8IUM7 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
NPAS4Q8IUM7 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
NPAS4Q8IUM7 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
NPAS4Q8IUM7 AC027612.3-201ENST00000413684 1047 ntBASIC24.36■■□□□ 1.49
NPAS4Q8IUM7 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
NPAS4Q8IUM7 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC24.36■■□□□ 1.49
NPAS4Q8IUM7 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
NPAS4Q8IUM7 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC24.36■■□□□ 1.49
NPAS4Q8IUM7 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
NPAS4Q8IUM7 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms