Protein–RNA interactions for Protein: Q86WB0

ZC3HC1, Nuclear-interacting partner of ALK, humanhuman

Known RBP Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1Q86WB0 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
ZC3HC1Q86WB0 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC22.5■■□□□ 1.19
ZC3HC1Q86WB0 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC22.49■■□□□ 1.19
ZC3HC1Q86WB0 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
ZC3HC1Q86WB0 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
ZC3HC1Q86WB0 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
ZC3HC1Q86WB0 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
ZC3HC1Q86WB0 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
ZC3HC1Q86WB0 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
ZC3HC1Q86WB0 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
ZC3HC1Q86WB0 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
ZC3HC1Q86WB0 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC22.49■■□□□ 1.19
ZC3HC1Q86WB0 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC22.48■■□□□ 1.19
ZC3HC1Q86WB0 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
ZC3HC1Q86WB0 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC22.48■■□□□ 1.19
ZC3HC1Q86WB0 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC22.48■■□□□ 1.19
ZC3HC1Q86WB0 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC22.48■■□□□ 1.19
ZC3HC1Q86WB0 AC103724.3-201ENST00000564481 992 ntBASIC22.48■■□□□ 1.19
ZC3HC1Q86WB0 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
ZC3HC1Q86WB0 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
ZC3HC1Q86WB0 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
ZC3HC1Q86WB0 C1orf229-201ENST00000623686 2258 ntBASIC22.48■■□□□ 1.19
ZC3HC1Q86WB0 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
ZC3HC1Q86WB0 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC22.48■■□□□ 1.19
ZC3HC1Q86WB0 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
ZC3HC1Q86WB0 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.48■■□□□ 1.19
ZC3HC1Q86WB0 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
ZC3HC1Q86WB0 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
ZC3HC1Q86WB0 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC22.47■■□□□ 1.19
ZC3HC1Q86WB0 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
ZC3HC1Q86WB0 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
ZC3HC1Q86WB0 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC22.47■■□□□ 1.19
ZC3HC1Q86WB0 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
ZC3HC1Q86WB0 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.47■■□□□ 1.19
ZC3HC1Q86WB0 AC079834.2-201ENST00000609776 1949 ntBASIC22.47■■□□□ 1.19
ZC3HC1Q86WB0 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
ZC3HC1Q86WB0 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
ZC3HC1Q86WB0 AC079630.1-202ENST00000618127 1840 ntBASIC22.46■■□□□ 1.19
ZC3HC1Q86WB0 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
ZC3HC1Q86WB0 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
ZC3HC1Q86WB0 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
ZC3HC1Q86WB0 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
ZC3HC1Q86WB0 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.46■■□□□ 1.19
ZC3HC1Q86WB0 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC22.46■■□□□ 1.19
ZC3HC1Q86WB0 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
ZC3HC1Q86WB0 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
ZC3HC1Q86WB0 KRT8P33-201ENST00000508125 1423 ntBASIC22.46■■□□□ 1.19
ZC3HC1Q86WB0 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.46■■□□□ 1.19
ZC3HC1Q86WB0 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
ZC3HC1Q86WB0 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.19
ZC3HC1Q86WB0 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC22.45■■□□□ 1.19
ZC3HC1Q86WB0 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ZC3HC1Q86WB0 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC22.45■■□□□ 1.18
ZC3HC1Q86WB0 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ZC3HC1Q86WB0 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ZC3HC1Q86WB0 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
ZC3HC1Q86WB0 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
ZC3HC1Q86WB0 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
ZC3HC1Q86WB0 AC233723.2-201ENST00000623798 2106 ntBASIC22.45■■□□□ 1.18
ZC3HC1Q86WB0 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
ZC3HC1Q86WB0 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
ZC3HC1Q86WB0 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
ZC3HC1Q86WB0 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
ZC3HC1Q86WB0 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC22.44■■□□□ 1.18
ZC3HC1Q86WB0 LSM7-203ENST00000585409 512 ntTSL 2 BASIC22.44■■□□□ 1.18
ZC3HC1Q86WB0 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
ZC3HC1Q86WB0 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
ZC3HC1Q86WB0 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
ZC3HC1Q86WB0 USF2-207ENST00000595068 1612 ntTSL 5 BASIC22.43■■□□□ 1.18
ZC3HC1Q86WB0 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC22.43■■□□□ 1.18
ZC3HC1Q86WB0 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
ZC3HC1Q86WB0 YBX1P4-201ENST00000392794 808 ntBASIC22.43■■□□□ 1.18
ZC3HC1Q86WB0 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC22.43■■□□□ 1.18
ZC3HC1Q86WB0 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
ZC3HC1Q86WB0 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC22.43■■□□□ 1.18
ZC3HC1Q86WB0 SNX5-217ENST00000606557 1087 ntBASIC22.43■■□□□ 1.18
ZC3HC1Q86WB0 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
ZC3HC1Q86WB0 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
ZC3HC1Q86WB0 AL117328.2-201ENST00000624617 1940 ntBASIC22.43■■□□□ 1.18
ZC3HC1Q86WB0 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
ZC3HC1Q86WB0 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC22.42■■□□□ 1.18
ZC3HC1Q86WB0 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
ZC3HC1Q86WB0 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
ZC3HC1Q86WB0 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC22.42■■□□□ 1.18
ZC3HC1Q86WB0 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC22.42■■□□□ 1.18
ZC3HC1Q86WB0 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC22.42■■□□□ 1.18
ZC3HC1Q86WB0 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
ZC3HC1Q86WB0 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
ZC3HC1Q86WB0 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
ZC3HC1Q86WB0 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
ZC3HC1Q86WB0 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
ZC3HC1Q86WB0 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
ZC3HC1Q86WB0 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
ZC3HC1Q86WB0 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
ZC3HC1Q86WB0 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
ZC3HC1Q86WB0 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
ZC3HC1Q86WB0 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
ZC3HC1Q86WB0 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
ZC3HC1Q86WB0 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ZC3HC1Q86WB0 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms