Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
ZNF546Q86UE3 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF546Q86UE3 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF546Q86UE3 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF546Q86UE3 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF546Q86UE3 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
ZNF546Q86UE3 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF546Q86UE3 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF546Q86UE3 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF546Q86UE3 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.72■□□□□ 0.59
ZNF546Q86UE3 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF546Q86UE3 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF546Q86UE3 ESRRAP2-201ENST00000418437 1549 ntBASIC18.72■□□□□ 0.59
ZNF546Q86UE3 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF546Q86UE3 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF546Q86UE3 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF546Q86UE3 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
ZNF546Q86UE3 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF546Q86UE3 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.72■□□□□ 0.59
ZNF546Q86UE3 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF546Q86UE3 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF546Q86UE3 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF546Q86UE3 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
ZNF546Q86UE3 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
ZNF546Q86UE3 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
ZNF546Q86UE3 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
ZNF546Q86UE3 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF546Q86UE3 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF546Q86UE3 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC18.71■□□□□ 0.59
ZNF546Q86UE3 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF546Q86UE3 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF546Q86UE3 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF546Q86UE3 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF546Q86UE3 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
ZNF546Q86UE3 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF546Q86UE3 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF546Q86UE3 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
ZNF546Q86UE3 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF546Q86UE3 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF546Q86UE3 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF546Q86UE3 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF546Q86UE3 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF546Q86UE3 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF546Q86UE3 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF546Q86UE3 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.7■□□□□ 0.58
ZNF546Q86UE3 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF546Q86UE3 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
ZNF546Q86UE3 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF546Q86UE3 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.7■□□□□ 0.58
ZNF546Q86UE3 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF546Q86UE3 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC18.7■□□□□ 0.58
ZNF546Q86UE3 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF546Q86UE3 AC073130.3-201ENST00000624389 2278 ntBASIC18.7■□□□□ 0.58
ZNF546Q86UE3 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC18.69■□□□□ 0.58
ZNF546Q86UE3 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.69■□□□□ 0.58
ZNF546Q86UE3 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF546Q86UE3 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF546Q86UE3 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF546Q86UE3 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.69■□□□□ 0.58
ZNF546Q86UE3 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.69■□□□□ 0.58
ZNF546Q86UE3 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ZNF546Q86UE3 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF546Q86UE3 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC18.69■□□□□ 0.58
ZNF546Q86UE3 CHST11-203ENST00000547956 936 ntTSL 2 BASIC18.69■□□□□ 0.58
ZNF546Q86UE3 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF546Q86UE3 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF546Q86UE3 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF546Q86UE3 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF546Q86UE3 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF546Q86UE3 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF546Q86UE3 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF546Q86UE3 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.68■□□□□ 0.58
ZNF546Q86UE3 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF546Q86UE3 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC18.68■□□□□ 0.58
ZNF546Q86UE3 HGH1-207ENST00000628266 258 ntTSL 5 BASIC18.68■□□□□ 0.58
ZNF546Q86UE3 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC18.68■□□□□ 0.58
ZNF546Q86UE3 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC18.68■□□□□ 0.58
ZNF546Q86UE3 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF546Q86UE3 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ZNF546Q86UE3 C11orf96-202ENST00000528572 1834 ntBASIC18.67■□□□□ 0.58
ZNF546Q86UE3 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF546Q86UE3 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF546Q86UE3 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF546Q86UE3 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF546Q86UE3 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC18.67■□□□□ 0.58
ZNF546Q86UE3 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF546Q86UE3 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF546Q86UE3 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF546Q86UE3 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF546Q86UE3 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
ZNF546Q86UE3 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF546Q86UE3 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
ZNF546Q86UE3 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.67■□□□□ 0.58
ZNF546Q86UE3 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF546Q86UE3 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ZNF546Q86UE3 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.66■□□□□ 0.58
ZNF546Q86UE3 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF546Q86UE3 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF546Q86UE3 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF546Q86UE3 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms