Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC14.12□□□□□ -0.15
VPS13BQ7Z7G8 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS13BQ7Z7G8 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS13BQ7Z7G8 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS13BQ7Z7G8 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS13BQ7Z7G8 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS13BQ7Z7G8 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VPS13BQ7Z7G8 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
VPS13BQ7Z7G8 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VPS13BQ7Z7G8 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
VPS13BQ7Z7G8 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VPS13BQ7Z7G8 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
VPS13BQ7Z7G8 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
VPS13BQ7Z7G8 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC14.11□□□□□ -0.15
VPS13BQ7Z7G8 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VPS13BQ7Z7G8 AC135731.1-201ENST00000569415 2548 ntBASIC14.1□□□□□ -0.15
VPS13BQ7Z7G8 VPS53-216ENST00000574029 585 ntTSL 4 BASIC14.1□□□□□ -0.15
VPS13BQ7Z7G8 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC14.1□□□□□ -0.15
VPS13BQ7Z7G8 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC14.1□□□□□ -0.15
VPS13BQ7Z7G8 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
VPS13BQ7Z7G8 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VPS13BQ7Z7G8 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC14.1□□□□□ -0.15
VPS13BQ7Z7G8 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
VPS13BQ7Z7G8 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
VPS13BQ7Z7G8 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC14.1□□□□□ -0.15
VPS13BQ7Z7G8 CCDC92B-201ENST00000575506 885 ntBASIC14.1□□□□□ -0.15
VPS13BQ7Z7G8 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
VPS13BQ7Z7G8 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
VPS13BQ7Z7G8 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
VPS13BQ7Z7G8 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VPS13BQ7Z7G8 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC14.09□□□□□ -0.15
VPS13BQ7Z7G8 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VPS13BQ7Z7G8 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
VPS13BQ7Z7G8 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC14.09□□□□□ -0.15
VPS13BQ7Z7G8 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC14.09□□□□□ -0.15
VPS13BQ7Z7G8 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC14.09□□□□□ -0.15
VPS13BQ7Z7G8 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
VPS13BQ7Z7G8 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VPS13BQ7Z7G8 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VPS13BQ7Z7G8 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
VPS13BQ7Z7G8 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VPS13BQ7Z7G8 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VPS13BQ7Z7G8 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
VPS13BQ7Z7G8 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC14.09□□□□□ -0.15
VPS13BQ7Z7G8 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
VPS13BQ7Z7G8 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC14.08□□□□□ -0.15
VPS13BQ7Z7G8 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC14.08□□□□□ -0.15
VPS13BQ7Z7G8 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VPS13BQ7Z7G8 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VPS13BQ7Z7G8 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VPS13BQ7Z7G8 AC006015.1-201ENST00000429970 570 ntBASIC14.08□□□□□ -0.16
VPS13BQ7Z7G8 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC14.08□□□□□ -0.16
VPS13BQ7Z7G8 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VPS13BQ7Z7G8 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
VPS13BQ7Z7G8 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VPS13BQ7Z7G8 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VPS13BQ7Z7G8 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VPS13BQ7Z7G8 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
VPS13BQ7Z7G8 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC14.08□□□□□ -0.16
VPS13BQ7Z7G8 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
VPS13BQ7Z7G8 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
VPS13BQ7Z7G8 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC14.08□□□□□ -0.16
VPS13BQ7Z7G8 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
VPS13BQ7Z7G8 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC14.07□□□□□ -0.16
VPS13BQ7Z7G8 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC14.07□□□□□ -0.16
VPS13BQ7Z7G8 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC14.07□□□□□ -0.16
VPS13BQ7Z7G8 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC14.07□□□□□ -0.16
VPS13BQ7Z7G8 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC14.07□□□□□ -0.16
VPS13BQ7Z7G8 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
VPS13BQ7Z7G8 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VPS13BQ7Z7G8 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
VPS13BQ7Z7G8 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC14.07□□□□□ -0.16
VPS13BQ7Z7G8 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC14.07□□□□□ -0.16
VPS13BQ7Z7G8 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC14.07□□□□□ -0.16
VPS13BQ7Z7G8 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
VPS13BQ7Z7G8 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
VPS13BQ7Z7G8 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
VPS13BQ7Z7G8 USF2-207ENST00000595068 1612 ntTSL 5 BASIC14.07□□□□□ -0.16
VPS13BQ7Z7G8 BX842568.3-201ENST00000418104 571 ntBASIC14.06□□□□□ -0.16
VPS13BQ7Z7G8 MIR3181-201ENST00000578512 73 ntBASIC14.06□□□□□ -0.16
VPS13BQ7Z7G8 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC14.06□□□□□ -0.16
VPS13BQ7Z7G8 pRNA.6-201ENST00000610482 90 ntBASIC14.06□□□□□ -0.16
VPS13BQ7Z7G8 pRNA.5-201ENST00000612139 90 ntBASIC14.06□□□□□ -0.16
VPS13BQ7Z7G8 pRNA.11-201ENST00000618423 90 ntBASIC14.06□□□□□ -0.16
VPS13BQ7Z7G8 pRNA.13-201ENST00000619112 90 ntBASIC14.06□□□□□ -0.16
VPS13BQ7Z7G8 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VPS13BQ7Z7G8 CD37-213ENST00000598095 1598 ntTSL 2 BASIC14.06□□□□□ -0.16
VPS13BQ7Z7G8 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC14.06□□□□□ -0.16
VPS13BQ7Z7G8 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VPS13BQ7Z7G8 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC14.06□□□□□ -0.16
VPS13BQ7Z7G8 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC14.06□□□□□ -0.16
VPS13BQ7Z7G8 GXYLT1P5-201ENST00000614548 1189 ntBASIC14.06□□□□□ -0.16
VPS13BQ7Z7G8 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
VPS13BQ7Z7G8 HLA-L-211ENST00000482052 1765 ntBASIC14.06□□□□□ -0.16
VPS13BQ7Z7G8 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC14.06□□□□□ -0.16
VPS13BQ7Z7G8 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC14.06□□□□□ -0.16
VPS13BQ7Z7G8 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VPS13BQ7Z7G8 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
VPS13BQ7Z7G8 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VPS13BQ7Z7G8 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms