Protein–RNA interactions for Protein: Q7L7L0

HIST3H2A, Histone H2A type 3, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2AQ7L7L0 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HIST3H2AQ7L7L0 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.51■□□□□ 0.87
HIST3H2AQ7L7L0 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HIST3H2AQ7L7L0 AC103724.3-201ENST00000564481 992 ntBASIC20.51■□□□□ 0.87
HIST3H2AQ7L7L0 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
HIST3H2AQ7L7L0 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HIST3H2AQ7L7L0 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
HIST3H2AQ7L7L0 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
HIST3H2AQ7L7L0 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
HIST3H2AQ7L7L0 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.5■□□□□ 0.87
HIST3H2AQ7L7L0 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.5■□□□□ 0.87
HIST3H2AQ7L7L0 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.5■□□□□ 0.87
HIST3H2AQ7L7L0 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.5■□□□□ 0.87
HIST3H2AQ7L7L0 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
HIST3H2AQ7L7L0 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.5■□□□□ 0.87
HIST3H2AQ7L7L0 AC079834.2-201ENST00000609776 1949 ntBASIC20.5■□□□□ 0.87
HIST3H2AQ7L7L0 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HIST3H2AQ7L7L0 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
HIST3H2AQ7L7L0 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HIST3H2AQ7L7L0 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.5■□□□□ 0.87
HIST3H2AQ7L7L0 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HIST3H2AQ7L7L0 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
HIST3H2AQ7L7L0 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
HIST3H2AQ7L7L0 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HIST3H2AQ7L7L0 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
HIST3H2AQ7L7L0 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
HIST3H2AQ7L7L0 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HIST3H2AQ7L7L0 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
HIST3H2AQ7L7L0 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.49■□□□□ 0.87
HIST3H2AQ7L7L0 AC004448.1-201ENST00000458332 883 ntBASIC20.49■□□□□ 0.87
HIST3H2AQ7L7L0 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HIST3H2AQ7L7L0 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.49■□□□□ 0.87
HIST3H2AQ7L7L0 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
HIST3H2AQ7L7L0 ANOS2P-203ENST00000472227 1816 ntBASIC20.48■□□□□ 0.87
HIST3H2AQ7L7L0 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HIST3H2AQ7L7L0 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.48■□□□□ 0.87
HIST3H2AQ7L7L0 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
HIST3H2AQ7L7L0 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.48■□□□□ 0.87
HIST3H2AQ7L7L0 AL031848.2-201ENST00000607670 837 ntBASIC20.48■□□□□ 0.87
HIST3H2AQ7L7L0 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
HIST3H2AQ7L7L0 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
HIST3H2AQ7L7L0 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.48■□□□□ 0.87
HIST3H2AQ7L7L0 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
HIST3H2AQ7L7L0 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HIST3H2AQ7L7L0 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
HIST3H2AQ7L7L0 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HIST3H2AQ7L7L0 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
HIST3H2AQ7L7L0 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.47■□□□□ 0.87
HIST3H2AQ7L7L0 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.47■□□□□ 0.87
HIST3H2AQ7L7L0 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
HIST3H2AQ7L7L0 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HIST3H2AQ7L7L0 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HIST3H2AQ7L7L0 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
HIST3H2AQ7L7L0 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
HIST3H2AQ7L7L0 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HIST3H2AQ7L7L0 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
HIST3H2AQ7L7L0 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.46■□□□□ 0.87
HIST3H2AQ7L7L0 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HIST3H2AQ7L7L0 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
HIST3H2AQ7L7L0 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HIST3H2AQ7L7L0 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HIST3H2AQ7L7L0 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.46■□□□□ 0.87
HIST3H2AQ7L7L0 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HIST3H2AQ7L7L0 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
HIST3H2AQ7L7L0 AC068473.5-201ENST00000616428 2072 ntBASIC20.46■□□□□ 0.87
HIST3H2AQ7L7L0 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HIST3H2AQ7L7L0 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HIST3H2AQ7L7L0 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
HIST3H2AQ7L7L0 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.46■□□□□ 0.87
HIST3H2AQ7L7L0 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.46■□□□□ 0.87
HIST3H2AQ7L7L0 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HIST3H2AQ7L7L0 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.46■□□□□ 0.87
HIST3H2AQ7L7L0 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
HIST3H2AQ7L7L0 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.46■□□□□ 0.87
HIST3H2AQ7L7L0 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HIST3H2AQ7L7L0 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HIST3H2AQ7L7L0 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HIST3H2AQ7L7L0 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
HIST3H2AQ7L7L0 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.45■□□□□ 0.86
HIST3H2AQ7L7L0 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HIST3H2AQ7L7L0 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
HIST3H2AQ7L7L0 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.45■□□□□ 0.86
HIST3H2AQ7L7L0 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HIST3H2AQ7L7L0 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HIST3H2AQ7L7L0 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.45■□□□□ 0.86
HIST3H2AQ7L7L0 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.45■□□□□ 0.86
HIST3H2AQ7L7L0 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HIST3H2AQ7L7L0 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
HIST3H2AQ7L7L0 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.44■□□□□ 0.86
HIST3H2AQ7L7L0 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
HIST3H2AQ7L7L0 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HIST3H2AQ7L7L0 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.44■□□□□ 0.86
HIST3H2AQ7L7L0 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
HIST3H2AQ7L7L0 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HIST3H2AQ7L7L0 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HIST3H2AQ7L7L0 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HIST3H2AQ7L7L0 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HIST3H2AQ7L7L0 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HIST3H2AQ7L7L0 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HIST3H2AQ7L7L0 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms