Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
TUBA1AQ71U36 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.69■□□□□ 0.9
TUBA1AQ71U36 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TUBA1AQ71U36 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.69■□□□□ 0.9
TUBA1AQ71U36 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TUBA1AQ71U36 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
TUBA1AQ71U36 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.69■□□□□ 0.9
TUBA1AQ71U36 MIR6089-201ENST00000616698 64 ntBASIC20.69■□□□□ 0.9
TUBA1AQ71U36 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TUBA1AQ71U36 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
TUBA1AQ71U36 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TUBA1AQ71U36 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.68■□□□□ 0.9
TUBA1AQ71U36 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TUBA1AQ71U36 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TUBA1AQ71U36 YBX1P4-201ENST00000392794 808 ntBASIC20.68■□□□□ 0.9
TUBA1AQ71U36 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.68■□□□□ 0.9
TUBA1AQ71U36 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.68■□□□□ 0.9
TUBA1AQ71U36 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TUBA1AQ71U36 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TUBA1AQ71U36 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TUBA1AQ71U36 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TUBA1AQ71U36 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
TUBA1AQ71U36 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
TUBA1AQ71U36 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TUBA1AQ71U36 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
TUBA1AQ71U36 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TUBA1AQ71U36 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TUBA1AQ71U36 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.67■□□□□ 0.9
TUBA1AQ71U36 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.67■□□□□ 0.9
TUBA1AQ71U36 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
TUBA1AQ71U36 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
TUBA1AQ71U36 ECEL1P1-201ENST00000373592 1742 ntBASIC20.67■□□□□ 0.9
TUBA1AQ71U36 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TUBA1AQ71U36 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TUBA1AQ71U36 GUSBP5-202ENST00000510805 1989 ntBASIC20.66■□□□□ 0.9
TUBA1AQ71U36 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TUBA1AQ71U36 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
TUBA1AQ71U36 AC019171.1-201ENST00000601251 1056 ntBASIC20.66■□□□□ 0.9
TUBA1AQ71U36 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TUBA1AQ71U36 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.66■□□□□ 0.9
TUBA1AQ71U36 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TUBA1AQ71U36 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.66■□□□□ 0.9
TUBA1AQ71U36 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TUBA1AQ71U36 FOXO3B-201ENST00000395675 1928 ntBASIC20.66■□□□□ 0.9
TUBA1AQ71U36 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TUBA1AQ71U36 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TUBA1AQ71U36 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TUBA1AQ71U36 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TUBA1AQ71U36 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TUBA1AQ71U36 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
TUBA1AQ71U36 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TUBA1AQ71U36 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TUBA1AQ71U36 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TUBA1AQ71U36 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TUBA1AQ71U36 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
TUBA1AQ71U36 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.65■□□□□ 0.9
TUBA1AQ71U36 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.65■□□□□ 0.9
TUBA1AQ71U36 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TUBA1AQ71U36 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TUBA1AQ71U36 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TUBA1AQ71U36 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
TUBA1AQ71U36 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TUBA1AQ71U36 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TUBA1AQ71U36 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TUBA1AQ71U36 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TUBA1AQ71U36 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TUBA1AQ71U36 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
TUBA1AQ71U36 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TUBA1AQ71U36 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TUBA1AQ71U36 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.64■□□□□ 0.89
TUBA1AQ71U36 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.64■□□□□ 0.89
TUBA1AQ71U36 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TUBA1AQ71U36 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
TUBA1AQ71U36 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TUBA1AQ71U36 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TUBA1AQ71U36 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TUBA1AQ71U36 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TUBA1AQ71U36 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TUBA1AQ71U36 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TUBA1AQ71U36 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.63■□□□□ 0.89
TUBA1AQ71U36 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TUBA1AQ71U36 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TUBA1AQ71U36 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TUBA1AQ71U36 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TUBA1AQ71U36 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TUBA1AQ71U36 MIR4508-201ENST00000584178 70 ntBASIC20.63■□□□□ 0.89
TUBA1AQ71U36 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TUBA1AQ71U36 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TUBA1AQ71U36 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TUBA1AQ71U36 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TUBA1AQ71U36 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TUBA1AQ71U36 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TUBA1AQ71U36 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
TUBA1AQ71U36 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TUBA1AQ71U36 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TUBA1AQ71U36 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
TUBA1AQ71U36 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TUBA1AQ71U36 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TUBA1AQ71U36 AL121603.2-201ENST00000557373 2117 ntBASIC20.62■□□□□ 0.89
TUBA1AQ71U36 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms