Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC22.58■■□□□ 1.21
RAPH1Q70E73 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
RAPH1Q70E73 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC22.58■■□□□ 1.21
RAPH1Q70E73 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RAPH1Q70E73 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC22.58■■□□□ 1.2
RAPH1Q70E73 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC22.57■■□□□ 1.2
RAPH1Q70E73 EI24-204ENST00000527235 1625 ntTSL 5 BASIC22.57■■□□□ 1.2
RAPH1Q70E73 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
RAPH1Q70E73 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC22.57■■□□□ 1.2
RAPH1Q70E73 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC22.57■■□□□ 1.2
RAPH1Q70E73 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC22.57■■□□□ 1.2
RAPH1Q70E73 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC22.57■■□□□ 1.2
RAPH1Q70E73 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
RAPH1Q70E73 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC22.57■■□□□ 1.2
RAPH1Q70E73 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC22.57■■□□□ 1.2
RAPH1Q70E73 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RAPH1Q70E73 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RAPH1Q70E73 GALC-202ENST00000393568 2054 ntTSL 2 BASIC22.56■■□□□ 1.2
RAPH1Q70E73 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RAPH1Q70E73 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
RAPH1Q70E73 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
RAPH1Q70E73 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
RAPH1Q70E73 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
RAPH1Q70E73 AC004987.1-201ENST00000428627 508 ntBASIC22.56■■□□□ 1.2
RAPH1Q70E73 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
RAPH1Q70E73 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC22.56■■□□□ 1.2
RAPH1Q70E73 AC120024.1-201ENST00000562672 995 ntBASIC22.56■■□□□ 1.2
RAPH1Q70E73 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
RAPH1Q70E73 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RAPH1Q70E73 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
RAPH1Q70E73 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RAPH1Q70E73 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RAPH1Q70E73 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RAPH1Q70E73 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RAPH1Q70E73 ATP5G2P3-201ENST00000429083 425 ntBASIC22.55■■□□□ 1.2
RAPH1Q70E73 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC22.55■■□□□ 1.2
RAPH1Q70E73 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC22.55■■□□□ 1.2
RAPH1Q70E73 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RAPH1Q70E73 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
RAPH1Q70E73 DUSP8P3-201ENST00000399571 1760 ntBASIC22.55■■□□□ 1.2
RAPH1Q70E73 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RAPH1Q70E73 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
RAPH1Q70E73 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RAPH1Q70E73 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
RAPH1Q70E73 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RAPH1Q70E73 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RAPH1Q70E73 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RAPH1Q70E73 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
RAPH1Q70E73 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC22.54■■□□□ 1.2
RAPH1Q70E73 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RAPH1Q70E73 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RAPH1Q70E73 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
RAPH1Q70E73 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RAPH1Q70E73 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RAPH1Q70E73 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC22.53■■□□□ 1.2
RAPH1Q70E73 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RAPH1Q70E73 IDNK-201ENST00000376417 511 ntTSL 5 BASIC22.53■■□□□ 1.2
RAPH1Q70E73 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RAPH1Q70E73 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RAPH1Q70E73 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RAPH1Q70E73 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RAPH1Q70E73 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC22.53■■□□□ 1.2
RAPH1Q70E73 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
RAPH1Q70E73 H19-210ENST00000439725 1929 ntTSL 2 BASIC22.53■■□□□ 1.2
RAPH1Q70E73 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
RAPH1Q70E73 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
RAPH1Q70E73 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RAPH1Q70E73 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RAPH1Q70E73 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RAPH1Q70E73 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
RAPH1Q70E73 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC22.52■■□□□ 1.2
RAPH1Q70E73 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
RAPH1Q70E73 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RAPH1Q70E73 LBH-205ENST00000407930 756 ntTSL 2 BASIC22.52■■□□□ 1.2
RAPH1Q70E73 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
RAPH1Q70E73 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC22.52■■□□□ 1.2
RAPH1Q70E73 AC074183.2-201ENST00000623112 922 ntBASIC22.52■■□□□ 1.2
RAPH1Q70E73 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RAPH1Q70E73 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RAPH1Q70E73 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
RAPH1Q70E73 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RAPH1Q70E73 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
RAPH1Q70E73 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RAPH1Q70E73 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RAPH1Q70E73 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC22.51■■□□□ 1.19
RAPH1Q70E73 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
RAPH1Q70E73 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC22.51■■□□□ 1.19
RAPH1Q70E73 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.51■■□□□ 1.19
RAPH1Q70E73 THA1P-201ENST00000590384 1145 ntBASIC22.51■■□□□ 1.19
RAPH1Q70E73 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RAPH1Q70E73 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC22.5■■□□□ 1.19
RAPH1Q70E73 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RAPH1Q70E73 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RAPH1Q70E73 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RAPH1Q70E73 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RAPH1Q70E73 AC010980.1-201ENST00000587192 1142 ntBASIC22.5■■□□□ 1.19
RAPH1Q70E73 PKD1P6-201ENST00000343738 4769 ntBASIC22.5■■□□□ 1.19
RAPH1Q70E73 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC22.5■■□□□ 1.19
RAPH1Q70E73 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
RAPH1Q70E73 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms