Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC149Q6ZUS6 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.84■■□□□ 1.41
CCDC149Q6ZUS6 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC149Q6ZUS6 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
CCDC149Q6ZUS6 AP003733.4-201ENST00000623785 1697 ntBASIC23.84■■□□□ 1.41
CCDC149Q6ZUS6 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC149Q6ZUS6 AC034268.1-201ENST00000441047 882 ntBASIC23.84■■□□□ 1.41
CCDC149Q6ZUS6 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC149Q6ZUS6 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.84■■□□□ 1.41
CCDC149Q6ZUS6 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.84■■□□□ 1.41
CCDC149Q6ZUS6 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC149Q6ZUS6 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC149Q6ZUS6 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC149Q6ZUS6 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC149Q6ZUS6 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC149Q6ZUS6 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC149Q6ZUS6 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
CCDC149Q6ZUS6 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
CCDC149Q6ZUS6 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CCDC149Q6ZUS6 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
CCDC149Q6ZUS6 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CCDC149Q6ZUS6 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.83■■□□□ 1.41
CCDC149Q6ZUS6 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC23.83■■□□□ 1.41
CCDC149Q6ZUS6 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC23.83■■□□□ 1.41
CCDC149Q6ZUS6 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC23.83■■□□□ 1.41
CCDC149Q6ZUS6 pRNA.6-201ENST00000610482 90 ntBASIC23.83■■□□□ 1.41
CCDC149Q6ZUS6 pRNA.5-201ENST00000612139 90 ntBASIC23.83■■□□□ 1.41
CCDC149Q6ZUS6 pRNA.11-201ENST00000618423 90 ntBASIC23.83■■□□□ 1.41
CCDC149Q6ZUS6 pRNA.13-201ENST00000619112 90 ntBASIC23.83■■□□□ 1.41
CCDC149Q6ZUS6 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CCDC149Q6ZUS6 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
CCDC149Q6ZUS6 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.83■■□□□ 1.4
CCDC149Q6ZUS6 AC141586.4-201ENST00000624558 1573 ntBASIC23.82■■□□□ 1.4
CCDC149Q6ZUS6 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.82■■□□□ 1.4
CCDC149Q6ZUS6 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC149Q6ZUS6 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.82■■□□□ 1.4
CCDC149Q6ZUS6 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC23.82■■□□□ 1.4
CCDC149Q6ZUS6 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.82■■□□□ 1.4
CCDC149Q6ZUS6 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC149Q6ZUS6 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC149Q6ZUS6 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
CCDC149Q6ZUS6 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC23.81■■□□□ 1.4
CCDC149Q6ZUS6 EI24-204ENST00000527235 1625 ntTSL 5 BASIC23.81■■□□□ 1.4
CCDC149Q6ZUS6 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC149Q6ZUS6 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC149Q6ZUS6 AC090192.1-201ENST00000517740 490 ntBASIC23.81■■□□□ 1.4
CCDC149Q6ZUS6 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC23.81■■□□□ 1.4
CCDC149Q6ZUS6 RARRES2P11-201ENST00000635158 484 ntBASIC23.81■■□□□ 1.4
CCDC149Q6ZUS6 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
CCDC149Q6ZUS6 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
CCDC149Q6ZUS6 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
CCDC149Q6ZUS6 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC149Q6ZUS6 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC149Q6ZUS6 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC23.8■■□□□ 1.4
CCDC149Q6ZUS6 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
CCDC149Q6ZUS6 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC23.8■■□□□ 1.4
CCDC149Q6ZUS6 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
CCDC149Q6ZUS6 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC149Q6ZUS6 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC149Q6ZUS6 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
CCDC149Q6ZUS6 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC149Q6ZUS6 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.8■■□□□ 1.4
CCDC149Q6ZUS6 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC149Q6ZUS6 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC23.79■■□□□ 1.4
CCDC149Q6ZUS6 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC23.79■■□□□ 1.4
CCDC149Q6ZUS6 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC149Q6ZUS6 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC23.79■■□□□ 1.4
CCDC149Q6ZUS6 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC149Q6ZUS6 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC149Q6ZUS6 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC23.79■■□□□ 1.4
CCDC149Q6ZUS6 AC022211.4-201ENST00000625094 2161 ntBASIC23.79■■□□□ 1.4
CCDC149Q6ZUS6 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC149Q6ZUS6 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC149Q6ZUS6 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC149Q6ZUS6 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC149Q6ZUS6 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC149Q6ZUS6 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC149Q6ZUS6 SNX3-202ENST00000349379 890 ntTSL 2 BASIC23.78■■□□□ 1.4
CCDC149Q6ZUS6 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC23.78■■□□□ 1.4
CCDC149Q6ZUS6 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC23.78■■□□□ 1.4
CCDC149Q6ZUS6 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC23.78■■□□□ 1.4
CCDC149Q6ZUS6 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC149Q6ZUS6 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC23.78■■□□□ 1.4
CCDC149Q6ZUS6 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC149Q6ZUS6 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
CCDC149Q6ZUS6 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC149Q6ZUS6 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC23.77■■□□□ 1.4
CCDC149Q6ZUS6 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC149Q6ZUS6 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC149Q6ZUS6 YBX1P1-201ENST00000445822 960 ntBASIC23.77■■□□□ 1.4
CCDC149Q6ZUS6 AC126544.1-201ENST00000580842 1059 ntBASIC23.77■■□□□ 1.4
CCDC149Q6ZUS6 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
CCDC149Q6ZUS6 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC149Q6ZUS6 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC149Q6ZUS6 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.77■■□□□ 1.4
CCDC149Q6ZUS6 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.77■■□□□ 1.4
CCDC149Q6ZUS6 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.77■■□□□ 1.4
CCDC149Q6ZUS6 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC149Q6ZUS6 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC23.76■■□□□ 1.39
CCDC149Q6ZUS6 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms