Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
COLCA1Q6ZS62 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
COLCA1Q6ZS62 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COLCA1Q6ZS62 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
COLCA1Q6ZS62 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
COLCA1Q6ZS62 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.52■□□□□ 0.72
COLCA1Q6ZS62 MTDHP2-201ENST00000601468 714 ntBASIC19.52■□□□□ 0.72
COLCA1Q6ZS62 AC010997.5-201ENST00000609182 354 ntBASIC19.52■□□□□ 0.72
COLCA1Q6ZS62 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
COLCA1Q6ZS62 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
COLCA1Q6ZS62 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
COLCA1Q6ZS62 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
COLCA1Q6ZS62 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.52■□□□□ 0.71
COLCA1Q6ZS62 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.52■□□□□ 0.71
COLCA1Q6ZS62 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
COLCA1Q6ZS62 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COLCA1Q6ZS62 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
COLCA1Q6ZS62 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COLCA1Q6ZS62 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
COLCA1Q6ZS62 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
COLCA1Q6ZS62 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
COLCA1Q6ZS62 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.51■□□□□ 0.71
COLCA1Q6ZS62 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
COLCA1Q6ZS62 DUSP8P3-201ENST00000399571 1760 ntBASIC19.51■□□□□ 0.71
COLCA1Q6ZS62 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COLCA1Q6ZS62 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
COLCA1Q6ZS62 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.51■□□□□ 0.71
COLCA1Q6ZS62 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COLCA1Q6ZS62 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COLCA1Q6ZS62 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COLCA1Q6ZS62 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
COLCA1Q6ZS62 UNC93B8-201ENST00000511903 705 ntBASIC19.5■□□□□ 0.71
COLCA1Q6ZS62 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COLCA1Q6ZS62 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.5■□□□□ 0.71
COLCA1Q6ZS62 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.5■□□□□ 0.71
COLCA1Q6ZS62 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.5■□□□□ 0.71
COLCA1Q6ZS62 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.5■□□□□ 0.71
COLCA1Q6ZS62 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.5■□□□□ 0.71
COLCA1Q6ZS62 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
COLCA1Q6ZS62 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
COLCA1Q6ZS62 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COLCA1Q6ZS62 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
COLCA1Q6ZS62 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
COLCA1Q6ZS62 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.49■□□□□ 0.71
COLCA1Q6ZS62 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.49■□□□□ 0.71
COLCA1Q6ZS62 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.49■□□□□ 0.71
COLCA1Q6ZS62 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.49■□□□□ 0.71
COLCA1Q6ZS62 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COLCA1Q6ZS62 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.49■□□□□ 0.71
COLCA1Q6ZS62 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.49■□□□□ 0.71
COLCA1Q6ZS62 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COLCA1Q6ZS62 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
COLCA1Q6ZS62 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COLCA1Q6ZS62 GUSBP5-201ENST00000418136 578 ntBASIC19.48■□□□□ 0.71
COLCA1Q6ZS62 TSPY9P-201ENST00000440215 945 ntBASIC19.48■□□□□ 0.71
COLCA1Q6ZS62 TSPY11P-201ENST00000442607 1045 ntBASIC19.48■□□□□ 0.71
COLCA1Q6ZS62 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
COLCA1Q6ZS62 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.48■□□□□ 0.71
COLCA1Q6ZS62 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.48■□□□□ 0.71
COLCA1Q6ZS62 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COLCA1Q6ZS62 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COLCA1Q6ZS62 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COLCA1Q6ZS62 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
COLCA1Q6ZS62 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.47■□□□□ 0.71
COLCA1Q6ZS62 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
COLCA1Q6ZS62 AC079630.1-202ENST00000618127 1840 ntBASIC19.47■□□□□ 0.71
COLCA1Q6ZS62 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COLCA1Q6ZS62 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
COLCA1Q6ZS62 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COLCA1Q6ZS62 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.47■□□□□ 0.71
COLCA1Q6ZS62 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
COLCA1Q6ZS62 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.47■□□□□ 0.71
COLCA1Q6ZS62 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COLCA1Q6ZS62 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COLCA1Q6ZS62 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
COLCA1Q6ZS62 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
COLCA1Q6ZS62 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
COLCA1Q6ZS62 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COLCA1Q6ZS62 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COLCA1Q6ZS62 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.46■□□□□ 0.71
COLCA1Q6ZS62 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COLCA1Q6ZS62 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
COLCA1Q6ZS62 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COLCA1Q6ZS62 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
COLCA1Q6ZS62 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COLCA1Q6ZS62 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COLCA1Q6ZS62 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COLCA1Q6ZS62 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.45■□□□□ 0.7
COLCA1Q6ZS62 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COLCA1Q6ZS62 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COLCA1Q6ZS62 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COLCA1Q6ZS62 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COLCA1Q6ZS62 MIR6724-1-201ENST00000616420 92 ntBASIC19.45■□□□□ 0.7
COLCA1Q6ZS62 MIR6724-2-201ENST00000616483 92 ntBASIC19.45■□□□□ 0.7
COLCA1Q6ZS62 MIR6724-4-201ENST00000617390 92 ntBASIC19.45■□□□□ 0.7
COLCA1Q6ZS62 MIR6724-3-201ENST00000622482 92 ntBASIC19.45■□□□□ 0.7
COLCA1Q6ZS62 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COLCA1Q6ZS62 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.45■□□□□ 0.7
COLCA1Q6ZS62 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
COLCA1Q6ZS62 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms