Protein–RNA interactions for Protein: Q6PJ21

SPSB3, SPRY domain-containing SOCS box protein 3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3Q6PJ21 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SPSB3Q6PJ21 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC18.17■□□□□ 0.5
SPSB3Q6PJ21 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC18.17■□□□□ 0.5
SPSB3Q6PJ21 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SPSB3Q6PJ21 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SPSB3Q6PJ21 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SPSB3Q6PJ21 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SPSB3Q6PJ21 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SPSB3Q6PJ21 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SPSB3Q6PJ21 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
SPSB3Q6PJ21 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SPSB3Q6PJ21 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.17■□□□□ 0.5
SPSB3Q6PJ21 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SPSB3Q6PJ21 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SPSB3Q6PJ21 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SPSB3Q6PJ21 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
SPSB3Q6PJ21 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.16■□□□□ 0.5
SPSB3Q6PJ21 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SPSB3Q6PJ21 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SPSB3Q6PJ21 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SPSB3Q6PJ21 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
SPSB3Q6PJ21 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SPSB3Q6PJ21 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SPSB3Q6PJ21 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SPSB3Q6PJ21 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.16■□□□□ 0.5
SPSB3Q6PJ21 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SPSB3Q6PJ21 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SPSB3Q6PJ21 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.15■□□□□ 0.5
SPSB3Q6PJ21 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SPSB3Q6PJ21 AC092068.2-201ENST00000590491 1708 ntBASIC18.15■□□□□ 0.5
SPSB3Q6PJ21 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SPSB3Q6PJ21 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.15■□□□□ 0.5
SPSB3Q6PJ21 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SPSB3Q6PJ21 AL592295.1-201ENST00000400984 884 ntBASIC18.15■□□□□ 0.5
SPSB3Q6PJ21 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC18.15■□□□□ 0.5
SPSB3Q6PJ21 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC18.15■□□□□ 0.5
SPSB3Q6PJ21 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SPSB3Q6PJ21 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SPSB3Q6PJ21 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SPSB3Q6PJ21 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SPSB3Q6PJ21 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
SPSB3Q6PJ21 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SPSB3Q6PJ21 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
SPSB3Q6PJ21 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.14■□□□□ 0.5
SPSB3Q6PJ21 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
SPSB3Q6PJ21 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SPSB3Q6PJ21 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.14■□□□□ 0.49
SPSB3Q6PJ21 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SPSB3Q6PJ21 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SPSB3Q6PJ21 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.14■□□□□ 0.49
SPSB3Q6PJ21 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
SPSB3Q6PJ21 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SPSB3Q6PJ21 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SPSB3Q6PJ21 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SPSB3Q6PJ21 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SPSB3Q6PJ21 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SPSB3Q6PJ21 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SPSB3Q6PJ21 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SPSB3Q6PJ21 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SPSB3Q6PJ21 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SPSB3Q6PJ21 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SPSB3Q6PJ21 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SPSB3Q6PJ21 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SPSB3Q6PJ21 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SPSB3Q6PJ21 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SPSB3Q6PJ21 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SPSB3Q6PJ21 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.13■□□□□ 0.49
SPSB3Q6PJ21 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SPSB3Q6PJ21 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SPSB3Q6PJ21 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC18.13■□□□□ 0.49
SPSB3Q6PJ21 AC139795.1-202ENST00000500444 432 ntBASIC18.13■□□□□ 0.49
SPSB3Q6PJ21 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC18.13■□□□□ 0.49
SPSB3Q6PJ21 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SPSB3Q6PJ21 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.13■□□□□ 0.49
SPSB3Q6PJ21 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SPSB3Q6PJ21 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC18.13■□□□□ 0.49
SPSB3Q6PJ21 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SPSB3Q6PJ21 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SPSB3Q6PJ21 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SPSB3Q6PJ21 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SPSB3Q6PJ21 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SPSB3Q6PJ21 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SPSB3Q6PJ21 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SPSB3Q6PJ21 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SPSB3Q6PJ21 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC18.12■□□□□ 0.49
SPSB3Q6PJ21 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
SPSB3Q6PJ21 LONRF2P2-201ENST00000439212 571 ntBASIC18.12■□□□□ 0.49
SPSB3Q6PJ21 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SPSB3Q6PJ21 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.12■□□□□ 0.49
SPSB3Q6PJ21 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SPSB3Q6PJ21 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
SPSB3Q6PJ21 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SPSB3Q6PJ21 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC18.12■□□□□ 0.49
SPSB3Q6PJ21 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.12■□□□□ 0.49
SPSB3Q6PJ21 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18.12■□□□□ 0.49
SPSB3Q6PJ21 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
SPSB3Q6PJ21 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPSB3Q6PJ21 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC18.11■□□□□ 0.49
SPSB3Q6PJ21 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SPSB3Q6PJ21 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms