Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
SWSAP1Q6NVH7 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
SWSAP1Q6NVH7 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
SWSAP1Q6NVH7 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SWSAP1Q6NVH7 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC25.29■■□□□ 1.64
SWSAP1Q6NVH7 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SWSAP1Q6NVH7 SERBP1P1-201ENST00000396021 1160 ntBASIC25.28■■□□□ 1.64
SWSAP1Q6NVH7 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC25.28■■□□□ 1.64
SWSAP1Q6NVH7 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC25.28■■□□□ 1.64
SWSAP1Q6NVH7 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC25.28■■□□□ 1.64
SWSAP1Q6NVH7 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC25.28■■□□□ 1.64
SWSAP1Q6NVH7 AC241377.3-202ENST00000626088 1088 ntBASIC25.28■■□□□ 1.64
SWSAP1Q6NVH7 AC241585.3-202ENST00000628937 1088 ntBASIC25.28■■□□□ 1.64
SWSAP1Q6NVH7 AC245100.8-202ENST00000629247 1058 ntBASIC25.28■■□□□ 1.64
SWSAP1Q6NVH7 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SWSAP1Q6NVH7 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
SWSAP1Q6NVH7 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
SWSAP1Q6NVH7 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SWSAP1Q6NVH7 SF1-220ENST00000626028 704 ntTSL 2 BASIC25.27■■□□□ 1.64
SWSAP1Q6NVH7 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
SWSAP1Q6NVH7 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SWSAP1Q6NVH7 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
SWSAP1Q6NVH7 VGF-203ENST00000611537 1622 ntTSL 5 BASIC25.26■■□□□ 1.63
SWSAP1Q6NVH7 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
SWSAP1Q6NVH7 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
SWSAP1Q6NVH7 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
SWSAP1Q6NVH7 AC006455.2-201ENST00000429931 906 ntBASIC25.26■■□□□ 1.63
SWSAP1Q6NVH7 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC25.26■■□□□ 1.63
SWSAP1Q6NVH7 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
SWSAP1Q6NVH7 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SWSAP1Q6NVH7 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC25.25■■□□□ 1.63
SWSAP1Q6NVH7 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
SWSAP1Q6NVH7 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
SWSAP1Q6NVH7 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
SWSAP1Q6NVH7 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC25.24■■□□□ 1.63
SWSAP1Q6NVH7 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC25.24■■□□□ 1.63
SWSAP1Q6NVH7 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC25.24■■□□□ 1.63
SWSAP1Q6NVH7 PTCHD3P2-201ENST00000424937 1205 ntBASIC25.24■■□□□ 1.63
SWSAP1Q6NVH7 AL031432.3-201ENST00000607698 485 ntBASIC25.24■■□□□ 1.63
SWSAP1Q6NVH7 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
SWSAP1Q6NVH7 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
SWSAP1Q6NVH7 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SWSAP1Q6NVH7 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
SWSAP1Q6NVH7 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
SWSAP1Q6NVH7 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SWSAP1Q6NVH7 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SWSAP1Q6NVH7 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
SWSAP1Q6NVH7 PREB-202ENST00000406567 1910 ntTSL 5 BASIC25.22■■□□□ 1.63
SWSAP1Q6NVH7 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
SWSAP1Q6NVH7 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SWSAP1Q6NVH7 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC25.22■■□□□ 1.63
SWSAP1Q6NVH7 AC009086.3-201ENST00000623486 1008 ntBASIC25.22■■□□□ 1.63
SWSAP1Q6NVH7 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SWSAP1Q6NVH7 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
SWSAP1Q6NVH7 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SWSAP1Q6NVH7 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SWSAP1Q6NVH7 ASB1-202ENST00000409297 878 ntTSL 5 BASIC25.21■■□□□ 1.63
SWSAP1Q6NVH7 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC25.21■■□□□ 1.63
SWSAP1Q6NVH7 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC25.21■■□□□ 1.63
SWSAP1Q6NVH7 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SWSAP1Q6NVH7 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
SWSAP1Q6NVH7 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC25.21■■□□□ 1.63
SWSAP1Q6NVH7 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
SWSAP1Q6NVH7 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC25.21■■□□□ 1.63
SWSAP1Q6NVH7 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC25.2■■□□□ 1.63
SWSAP1Q6NVH7 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.63
SWSAP1Q6NVH7 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
SWSAP1Q6NVH7 EDA-201ENST00000338901 1233 ntBASIC25.2■■□□□ 1.62
SWSAP1Q6NVH7 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC25.2■■□□□ 1.62
SWSAP1Q6NVH7 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
SWSAP1Q6NVH7 SUDS3P1-201ENST00000505831 966 ntBASIC25.2■■□□□ 1.62
SWSAP1Q6NVH7 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC25.2■■□□□ 1.62
SWSAP1Q6NVH7 AC142381.2-201ENST00000566120 298 ntBASIC25.2■■□□□ 1.62
SWSAP1Q6NVH7 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
SWSAP1Q6NVH7 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SWSAP1Q6NVH7 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SWSAP1Q6NVH7 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC25.19■■□□□ 1.62
SWSAP1Q6NVH7 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SWSAP1Q6NVH7 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
SWSAP1Q6NVH7 PTMA-205ENST00000410064 814 ntTSL 2 BASIC25.19■■□□□ 1.62
SWSAP1Q6NVH7 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC25.19■■□□□ 1.62
SWSAP1Q6NVH7 MIR4767-201ENST00000582827 78 ntBASIC25.19■■□□□ 1.62
SWSAP1Q6NVH7 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC25.19■■□□□ 1.62
SWSAP1Q6NVH7 AL355001.2-201ENST00000620617 1191 ntBASIC25.19■■□□□ 1.62
SWSAP1Q6NVH7 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
SWSAP1Q6NVH7 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
SWSAP1Q6NVH7 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC25.18■■□□□ 1.62
SWSAP1Q6NVH7 ABCB10P4-201ENST00000566803 2184 ntBASIC25.18■■□□□ 1.62
SWSAP1Q6NVH7 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
SWSAP1Q6NVH7 HES6-206ENST00000409574 738 ntTSL 2 BASIC25.18■■□□□ 1.62
SWSAP1Q6NVH7 MIR3181-201ENST00000578512 73 ntBASIC25.18■■□□□ 1.62
SWSAP1Q6NVH7 AL138724.1-201ENST00000606771 1088 ntBASIC25.18■■□□□ 1.62
SWSAP1Q6NVH7 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC25.18■■□□□ 1.62
SWSAP1Q6NVH7 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC25.18■■□□□ 1.62
SWSAP1Q6NVH7 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC25.18■■□□□ 1.62
SWSAP1Q6NVH7 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
SWSAP1Q6NVH7 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC25.18■■□□□ 1.62
SWSAP1Q6NVH7 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
SWSAP1Q6NVH7 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC25.17■■□□□ 1.62
SWSAP1Q6NVH7 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC25.17■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 304.1 ms