Protein–RNA interactions for Protein: Q5VT28

FAM27B, Protein FAM27A/B/C, humanhuman

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM27BQ5VT28 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FAM27BQ5VT28 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.82■□□□□ 0.76
FAM27BQ5VT28 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
FAM27BQ5VT28 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
FAM27BQ5VT28 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
FAM27BQ5VT28 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
FAM27BQ5VT28 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.81■□□□□ 0.76
FAM27BQ5VT28 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
FAM27BQ5VT28 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
FAM27BQ5VT28 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
FAM27BQ5VT28 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.81■□□□□ 0.76
FAM27BQ5VT28 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
FAM27BQ5VT28 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
FAM27BQ5VT28 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
FAM27BQ5VT28 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
FAM27BQ5VT28 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
FAM27BQ5VT28 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
FAM27BQ5VT28 UNC93B8-201ENST00000511903 705 ntBASIC19.8■□□□□ 0.76
FAM27BQ5VT28 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.8■□□□□ 0.76
FAM27BQ5VT28 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
FAM27BQ5VT28 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
FAM27BQ5VT28 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.8■□□□□ 0.76
FAM27BQ5VT28 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
FAM27BQ5VT28 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
FAM27BQ5VT28 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.8■□□□□ 0.76
FAM27BQ5VT28 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
FAM27BQ5VT28 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
FAM27BQ5VT28 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
FAM27BQ5VT28 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
FAM27BQ5VT28 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.79■□□□□ 0.76
FAM27BQ5VT28 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.79■□□□□ 0.76
FAM27BQ5VT28 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.79■□□□□ 0.76
FAM27BQ5VT28 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.79■□□□□ 0.76
FAM27BQ5VT28 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.79■□□□□ 0.76
FAM27BQ5VT28 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
FAM27BQ5VT28 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.79■□□□□ 0.76
FAM27BQ5VT28 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.79■□□□□ 0.76
FAM27BQ5VT28 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
FAM27BQ5VT28 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
FAM27BQ5VT28 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
FAM27BQ5VT28 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
FAM27BQ5VT28 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.79■□□□□ 0.76
FAM27BQ5VT28 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
FAM27BQ5VT28 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
FAM27BQ5VT28 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
FAM27BQ5VT28 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
FAM27BQ5VT28 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.78■□□□□ 0.76
FAM27BQ5VT28 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.78■□□□□ 0.76
FAM27BQ5VT28 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
FAM27BQ5VT28 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
FAM27BQ5VT28 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.78■□□□□ 0.76
FAM27BQ5VT28 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
FAM27BQ5VT28 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
FAM27BQ5VT28 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
FAM27BQ5VT28 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.77■□□□□ 0.76
FAM27BQ5VT28 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.77■□□□□ 0.76
FAM27BQ5VT28 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.77■□□□□ 0.76
FAM27BQ5VT28 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
FAM27BQ5VT28 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.76■□□□□ 0.75
FAM27BQ5VT28 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FAM27BQ5VT28 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
FAM27BQ5VT28 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
FAM27BQ5VT28 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.76■□□□□ 0.75
FAM27BQ5VT28 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FAM27BQ5VT28 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FAM27BQ5VT28 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FAM27BQ5VT28 DUSP8P3-201ENST00000399571 1760 ntBASIC19.76■□□□□ 0.75
FAM27BQ5VT28 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FAM27BQ5VT28 GUSBP5-201ENST00000418136 578 ntBASIC19.76■□□□□ 0.75
FAM27BQ5VT28 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
FAM27BQ5VT28 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.76■□□□□ 0.75
FAM27BQ5VT28 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
FAM27BQ5VT28 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
FAM27BQ5VT28 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
FAM27BQ5VT28 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
FAM27BQ5VT28 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.75■□□□□ 0.75
FAM27BQ5VT28 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
FAM27BQ5VT28 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FAM27BQ5VT28 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.75■□□□□ 0.75
FAM27BQ5VT28 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
FAM27BQ5VT28 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
FAM27BQ5VT28 AC079630.1-202ENST00000618127 1840 ntBASIC19.75■□□□□ 0.75
FAM27BQ5VT28 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
FAM27BQ5VT28 MIR6724-1-201ENST00000616420 92 ntBASIC19.75■□□□□ 0.75
FAM27BQ5VT28 MIR6724-2-201ENST00000616483 92 ntBASIC19.75■□□□□ 0.75
FAM27BQ5VT28 MIR6724-4-201ENST00000617390 92 ntBASIC19.75■□□□□ 0.75
FAM27BQ5VT28 MIR6724-3-201ENST00000622482 92 ntBASIC19.75■□□□□ 0.75
FAM27BQ5VT28 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
FAM27BQ5VT28 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FAM27BQ5VT28 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
FAM27BQ5VT28 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.75■□□□□ 0.75
FAM27BQ5VT28 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
FAM27BQ5VT28 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
FAM27BQ5VT28 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
FAM27BQ5VT28 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
FAM27BQ5VT28 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
FAM27BQ5VT28 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.74■□□□□ 0.75
FAM27BQ5VT28 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.74■□□□□ 0.75
FAM27BQ5VT28 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
FAM27BQ5VT28 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms