Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ARFGEF3Q5TH69 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ARFGEF3Q5TH69 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
ARFGEF3Q5TH69 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
ARFGEF3Q5TH69 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ARFGEF3Q5TH69 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ARFGEF3Q5TH69 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
ARFGEF3Q5TH69 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC19.24■□□□□ 0.67
ARFGEF3Q5TH69 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.24■□□□□ 0.67
ARFGEF3Q5TH69 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.23■□□□□ 0.67
ARFGEF3Q5TH69 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ARFGEF3Q5TH69 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.23■□□□□ 0.67
ARFGEF3Q5TH69 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ARFGEF3Q5TH69 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
ARFGEF3Q5TH69 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ARFGEF3Q5TH69 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ARFGEF3Q5TH69 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.23■□□□□ 0.67
ARFGEF3Q5TH69 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.23■□□□□ 0.67
ARFGEF3Q5TH69 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ARFGEF3Q5TH69 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ARFGEF3Q5TH69 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ARFGEF3Q5TH69 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ARFGEF3Q5TH69 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ARFGEF3Q5TH69 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ARFGEF3Q5TH69 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.22■□□□□ 0.67
ARFGEF3Q5TH69 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ARFGEF3Q5TH69 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ARFGEF3Q5TH69 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.22■□□□□ 0.67
ARFGEF3Q5TH69 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ARFGEF3Q5TH69 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
ARFGEF3Q5TH69 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ARFGEF3Q5TH69 AC105265.2-201ENST00000467189 838 ntBASIC19.22■□□□□ 0.67
ARFGEF3Q5TH69 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
ARFGEF3Q5TH69 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ARFGEF3Q5TH69 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
ARFGEF3Q5TH69 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.21■□□□□ 0.67
ARFGEF3Q5TH69 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.21■□□□□ 0.67
ARFGEF3Q5TH69 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.21■□□□□ 0.67
ARFGEF3Q5TH69 AL136967.2-201ENST00000623968 743 ntBASIC19.21■□□□□ 0.67
ARFGEF3Q5TH69 AC142381.3-201ENST00000568208 1670 ntBASIC19.21■□□□□ 0.67
ARFGEF3Q5TH69 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
ARFGEF3Q5TH69 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ARFGEF3Q5TH69 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ARFGEF3Q5TH69 RASA4CP-201ENST00000424092 1398 ntBASIC19.2■□□□□ 0.66
ARFGEF3Q5TH69 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ARFGEF3Q5TH69 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ARFGEF3Q5TH69 MIR4767-201ENST00000582827 78 ntBASIC19.2■□□□□ 0.66
ARFGEF3Q5TH69 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
ARFGEF3Q5TH69 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ARFGEF3Q5TH69 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ARFGEF3Q5TH69 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.2■□□□□ 0.66
ARFGEF3Q5TH69 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
ARFGEF3Q5TH69 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.2■□□□□ 0.66
ARFGEF3Q5TH69 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ARFGEF3Q5TH69 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ARFGEF3Q5TH69 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ARFGEF3Q5TH69 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ARFGEF3Q5TH69 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARFGEF3Q5TH69 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARFGEF3Q5TH69 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.19■□□□□ 0.66
ARFGEF3Q5TH69 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ARFGEF3Q5TH69 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARFGEF3Q5TH69 LINC00543-201ENST00000567234 1845 ntBASIC19.19■□□□□ 0.66
ARFGEF3Q5TH69 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.19■□□□□ 0.66
ARFGEF3Q5TH69 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ARFGEF3Q5TH69 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARFGEF3Q5TH69 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARFGEF3Q5TH69 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARFGEF3Q5TH69 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
ARFGEF3Q5TH69 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
ARFGEF3Q5TH69 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARFGEF3Q5TH69 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARFGEF3Q5TH69 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.19■□□□□ 0.66
ARFGEF3Q5TH69 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
ARFGEF3Q5TH69 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ARFGEF3Q5TH69 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ARFGEF3Q5TH69 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.18■□□□□ 0.66
ARFGEF3Q5TH69 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ARFGEF3Q5TH69 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ARFGEF3Q5TH69 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.18■□□□□ 0.66
ARFGEF3Q5TH69 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.18■□□□□ 0.66
ARFGEF3Q5TH69 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.18■□□□□ 0.66
ARFGEF3Q5TH69 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.18■□□□□ 0.66
ARFGEF3Q5TH69 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.18■□□□□ 0.66
ARFGEF3Q5TH69 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.18■□□□□ 0.66
ARFGEF3Q5TH69 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ARFGEF3Q5TH69 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ARFGEF3Q5TH69 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
ARFGEF3Q5TH69 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ARFGEF3Q5TH69 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.17■□□□□ 0.66
ARFGEF3Q5TH69 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ARFGEF3Q5TH69 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ARFGEF3Q5TH69 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ARFGEF3Q5TH69 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ARFGEF3Q5TH69 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.17■□□□□ 0.66
ARFGEF3Q5TH69 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
ARFGEF3Q5TH69 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.17■□□□□ 0.66
ARFGEF3Q5TH69 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ARFGEF3Q5TH69 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ARFGEF3Q5TH69 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms