Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC24.07■■□□□ 1.44
VARS2Q5ST30 AC105265.2-201ENST00000467189 838 ntBASIC24.07■■□□□ 1.44
VARS2Q5ST30 MIR3181-201ENST00000578512 73 ntBASIC24.07■■□□□ 1.44
VARS2Q5ST30 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
VARS2Q5ST30 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
VARS2Q5ST30 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC24.07■■□□□ 1.44
VARS2Q5ST30 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
VARS2Q5ST30 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
VARS2Q5ST30 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
VARS2Q5ST30 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
VARS2Q5ST30 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
VARS2Q5ST30 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
VARS2Q5ST30 MAG-206ENST00000597035 542 ntTSL 4 BASIC24.06■■□□□ 1.44
VARS2Q5ST30 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC24.06■■□□□ 1.44
VARS2Q5ST30 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC24.06■■□□□ 1.44
VARS2Q5ST30 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC24.06■■□□□ 1.44
VARS2Q5ST30 AC136469.2-201ENST00000623944 1028 ntBASIC24.06■■□□□ 1.44
VARS2Q5ST30 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC24.06■■□□□ 1.44
VARS2Q5ST30 EED-207ENST00000528180 1745 ntTSL 5 BASIC24.06■■□□□ 1.44
VARS2Q5ST30 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
VARS2Q5ST30 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC24.06■■□□□ 1.44
VARS2Q5ST30 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC24.05■■□□□ 1.44
VARS2Q5ST30 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
VARS2Q5ST30 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
VARS2Q5ST30 AC026271.2-201ENST00000428091 497 ntBASIC24.05■■□□□ 1.44
VARS2Q5ST30 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC24.05■■□□□ 1.44
VARS2Q5ST30 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC24.05■■□□□ 1.44
VARS2Q5ST30 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
VARS2Q5ST30 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
VARS2Q5ST30 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
VARS2Q5ST30 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC24.04■■□□□ 1.44
VARS2Q5ST30 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
VARS2Q5ST30 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
VARS2Q5ST30 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
VARS2Q5ST30 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC24.03■■□□□ 1.44
VARS2Q5ST30 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC24.03■■□□□ 1.44
VARS2Q5ST30 LGR4-203ENST00000480977 492 ntTSL 2 BASIC24.03■■□□□ 1.44
VARS2Q5ST30 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
VARS2Q5ST30 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
VARS2Q5ST30 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
VARS2Q5ST30 RASA4CP-201ENST00000424092 1398 ntBASIC24.03■■□□□ 1.44
VARS2Q5ST30 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
VARS2Q5ST30 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
VARS2Q5ST30 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
VARS2Q5ST30 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC24.02■■□□□ 1.44
VARS2Q5ST30 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
VARS2Q5ST30 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC24.02■■□□□ 1.44
VARS2Q5ST30 STOX2-205ENST00000513034 807 ntTSL 3 BASIC24.02■■□□□ 1.44
VARS2Q5ST30 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC24.02■■□□□ 1.44
VARS2Q5ST30 AC027682.1-201ENST00000562846 899 ntBASIC24.02■■□□□ 1.44
VARS2Q5ST30 AC008764.7-201ENST00000593779 1081 ntBASIC24.02■■□□□ 1.44
VARS2Q5ST30 CA15P2-201ENST00000611168 834 ntBASIC24.02■■□□□ 1.44
VARS2Q5ST30 MIR5787-201ENST00000611784 55 ntBASIC24.02■■□□□ 1.44
VARS2Q5ST30 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC24.02■■□□□ 1.44
VARS2Q5ST30 EI24-213ENST00000618552 1747 ntTSL 5 BASIC24.01■■□□□ 1.43
VARS2Q5ST30 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
VARS2Q5ST30 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
VARS2Q5ST30 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
VARS2Q5ST30 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC24.01■■□□□ 1.43
VARS2Q5ST30 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
VARS2Q5ST30 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
VARS2Q5ST30 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
VARS2Q5ST30 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
VARS2Q5ST30 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC24.01■■□□□ 1.43
VARS2Q5ST30 pRNA.6-201ENST00000610482 90 ntBASIC24.01■■□□□ 1.43
VARS2Q5ST30 pRNA.5-201ENST00000612139 90 ntBASIC24.01■■□□□ 1.43
VARS2Q5ST30 pRNA.11-201ENST00000618423 90 ntBASIC24.01■■□□□ 1.43
VARS2Q5ST30 pRNA.13-201ENST00000619112 90 ntBASIC24.01■■□□□ 1.43
VARS2Q5ST30 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC24■■□□□ 1.43
VARS2Q5ST30 GTSE1-AS1-202ENST00000623117 1518 ntBASIC24■■□□□ 1.43
VARS2Q5ST30 AC141586.4-201ENST00000624558 1573 ntBASIC24■■□□□ 1.43
VARS2Q5ST30 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
VARS2Q5ST30 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC24■■□□□ 1.43
VARS2Q5ST30 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC24■■□□□ 1.43
VARS2Q5ST30 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
VARS2Q5ST30 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC24■■□□□ 1.43
VARS2Q5ST30 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC24■■□□□ 1.43
VARS2Q5ST30 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
VARS2Q5ST30 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
VARS2Q5ST30 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC24■■□□□ 1.43
VARS2Q5ST30 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
VARS2Q5ST30 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
VARS2Q5ST30 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
VARS2Q5ST30 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
VARS2Q5ST30 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
VARS2Q5ST30 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
VARS2Q5ST30 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
VARS2Q5ST30 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.99■■□□□ 1.43
VARS2Q5ST30 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.99■■□□□ 1.43
VARS2Q5ST30 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
VARS2Q5ST30 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.99■■□□□ 1.43
VARS2Q5ST30 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
VARS2Q5ST30 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC23.99■■□□□ 1.43
VARS2Q5ST30 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
VARS2Q5ST30 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
VARS2Q5ST30 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
VARS2Q5ST30 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
VARS2Q5ST30 AC099791.1-201ENST00000416440 715 ntBASIC23.98■■□□□ 1.43
VARS2Q5ST30 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC23.98■■□□□ 1.43
VARS2Q5ST30 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms