Protein–RNA interactions for Protein: Q5RL73

RBM48, RNA-binding protein 48, humanhuman

Known RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48Q5RL73 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RBM48Q5RL73 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.62■□□□□ 0.89
RBM48Q5RL73 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RBM48Q5RL73 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RBM48Q5RL73 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC20.62■□□□□ 0.89
RBM48Q5RL73 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
RBM48Q5RL73 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.62■□□□□ 0.89
RBM48Q5RL73 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RBM48Q5RL73 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RBM48Q5RL73 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.61■□□□□ 0.89
RBM48Q5RL73 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
RBM48Q5RL73 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
RBM48Q5RL73 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RBM48Q5RL73 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RBM48Q5RL73 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RBM48Q5RL73 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.61■□□□□ 0.89
RBM48Q5RL73 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.61■□□□□ 0.89
RBM48Q5RL73 AC025884.2-201ENST00000553429 711 ntBASIC20.61■□□□□ 0.89
RBM48Q5RL73 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.61■□□□□ 0.89
RBM48Q5RL73 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RBM48Q5RL73 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RBM48Q5RL73 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RBM48Q5RL73 AC139530.1-201ENST00000575312 1977 ntBASIC20.61■□□□□ 0.89
RBM48Q5RL73 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.61■□□□□ 0.89
RBM48Q5RL73 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.61■□□□□ 0.89
RBM48Q5RL73 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.6■□□□□ 0.89
RBM48Q5RL73 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
RBM48Q5RL73 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
RBM48Q5RL73 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
RBM48Q5RL73 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.6■□□□□ 0.89
RBM48Q5RL73 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.6■□□□□ 0.89
RBM48Q5RL73 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RBM48Q5RL73 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.6■□□□□ 0.89
RBM48Q5RL73 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.6■□□□□ 0.89
RBM48Q5RL73 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RBM48Q5RL73 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.6■□□□□ 0.89
RBM48Q5RL73 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.6■□□□□ 0.89
RBM48Q5RL73 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RBM48Q5RL73 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RBM48Q5RL73 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.6■□□□□ 0.89
RBM48Q5RL73 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.6■□□□□ 0.89
RBM48Q5RL73 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RBM48Q5RL73 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RBM48Q5RL73 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RBM48Q5RL73 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RBM48Q5RL73 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RBM48Q5RL73 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RBM48Q5RL73 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RBM48Q5RL73 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RBM48Q5RL73 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
RBM48Q5RL73 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.58■□□□□ 0.89
RBM48Q5RL73 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.58■□□□□ 0.89
RBM48Q5RL73 DUX4L11-201ENST00000611504 1267 ntBASIC20.58■□□□□ 0.89
RBM48Q5RL73 DUX4L12-201ENST00000614593 1267 ntBASIC20.58■□□□□ 0.89
RBM48Q5RL73 DUX4L14-201ENST00000621227 1267 ntBASIC20.58■□□□□ 0.89
RBM48Q5RL73 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.58■□□□□ 0.88
RBM48Q5RL73 FBXW4P1-201ENST00000426721 2239 ntBASIC20.58■□□□□ 0.88
RBM48Q5RL73 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
RBM48Q5RL73 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RBM48Q5RL73 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
RBM48Q5RL73 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RBM48Q5RL73 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
RBM48Q5RL73 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RBM48Q5RL73 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
RBM48Q5RL73 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.57■□□□□ 0.88
RBM48Q5RL73 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RBM48Q5RL73 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RBM48Q5RL73 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RBM48Q5RL73 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RBM48Q5RL73 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.57■□□□□ 0.88
RBM48Q5RL73 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.57■□□□□ 0.88
RBM48Q5RL73 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
RBM48Q5RL73 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
RBM48Q5RL73 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
RBM48Q5RL73 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
RBM48Q5RL73 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RBM48Q5RL73 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.56■□□□□ 0.88
RBM48Q5RL73 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
RBM48Q5RL73 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.56■□□□□ 0.88
RBM48Q5RL73 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RBM48Q5RL73 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
RBM48Q5RL73 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RBM48Q5RL73 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
RBM48Q5RL73 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RBM48Q5RL73 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
RBM48Q5RL73 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RBM48Q5RL73 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RBM48Q5RL73 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RBM48Q5RL73 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
RBM48Q5RL73 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RBM48Q5RL73 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RBM48Q5RL73 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
RBM48Q5RL73 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
RBM48Q5RL73 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
RBM48Q5RL73 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RBM48Q5RL73 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
RBM48Q5RL73 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RBM48Q5RL73 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RBM48Q5RL73 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
RBM48Q5RL73 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms