Protein–RNA interactions for Protein: Q53EP0

FNDC3B, Fibronectin type III domain-containing protein 3B, humanhuman

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3BQ53EP0 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
FNDC3BQ53EP0 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC22.93■■□□□ 1.26
FNDC3BQ53EP0 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
FNDC3BQ53EP0 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
FNDC3BQ53EP0 AC105265.2-201ENST00000467189 838 ntBASIC22.93■■□□□ 1.26
FNDC3BQ53EP0 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC22.93■■□□□ 1.26
FNDC3BQ53EP0 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC22.93■■□□□ 1.26
FNDC3BQ53EP0 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC22.93■■□□□ 1.26
FNDC3BQ53EP0 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
FNDC3BQ53EP0 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
FNDC3BQ53EP0 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC22.93■■□□□ 1.26
FNDC3BQ53EP0 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
FNDC3BQ53EP0 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
FNDC3BQ53EP0 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
FNDC3BQ53EP0 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
FNDC3BQ53EP0 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.92■■□□□ 1.26
FNDC3BQ53EP0 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
FNDC3BQ53EP0 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
FNDC3BQ53EP0 AC091305.1-201ENST00000479476 895 ntBASIC22.92■■□□□ 1.26
FNDC3BQ53EP0 MIR3181-201ENST00000578512 73 ntBASIC22.92■■□□□ 1.26
FNDC3BQ53EP0 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
FNDC3BQ53EP0 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
FNDC3BQ53EP0 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
FNDC3BQ53EP0 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC22.91■■□□□ 1.26
FNDC3BQ53EP0 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
FNDC3BQ53EP0 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
FNDC3BQ53EP0 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC22.91■■□□□ 1.26
FNDC3BQ53EP0 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC22.91■■□□□ 1.26
FNDC3BQ53EP0 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
FNDC3BQ53EP0 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
FNDC3BQ53EP0 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
FNDC3BQ53EP0 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
FNDC3BQ53EP0 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC22.91■■□□□ 1.26
FNDC3BQ53EP0 LGR4-203ENST00000480977 492 ntTSL 2 BASIC22.91■■□□□ 1.26
FNDC3BQ53EP0 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
FNDC3BQ53EP0 AC008764.7-201ENST00000593779 1081 ntBASIC22.91■■□□□ 1.26
FNDC3BQ53EP0 AC136469.2-201ENST00000623944 1028 ntBASIC22.91■■□□□ 1.26
FNDC3BQ53EP0 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
FNDC3BQ53EP0 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC22.91■■□□□ 1.26
FNDC3BQ53EP0 EED-207ENST00000528180 1745 ntTSL 5 BASIC22.91■■□□□ 1.26
FNDC3BQ53EP0 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
FNDC3BQ53EP0 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
FNDC3BQ53EP0 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
FNDC3BQ53EP0 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
FNDC3BQ53EP0 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC22.9■■□□□ 1.26
FNDC3BQ53EP0 AC027682.1-201ENST00000562846 899 ntBASIC22.9■■□□□ 1.26
FNDC3BQ53EP0 MAG-206ENST00000597035 542 ntTSL 4 BASIC22.9■■□□□ 1.26
FNDC3BQ53EP0 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
FNDC3BQ53EP0 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
FNDC3BQ53EP0 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.89■■□□□ 1.26
FNDC3BQ53EP0 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
FNDC3BQ53EP0 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC22.89■■□□□ 1.25
FNDC3BQ53EP0 pRNA.6-201ENST00000610482 90 ntBASIC22.89■■□□□ 1.25
FNDC3BQ53EP0 pRNA.5-201ENST00000612139 90 ntBASIC22.89■■□□□ 1.25
FNDC3BQ53EP0 pRNA.11-201ENST00000618423 90 ntBASIC22.89■■□□□ 1.25
FNDC3BQ53EP0 pRNA.13-201ENST00000619112 90 ntBASIC22.89■■□□□ 1.25
FNDC3BQ53EP0 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
FNDC3BQ53EP0 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
FNDC3BQ53EP0 AC141586.4-201ENST00000624558 1573 ntBASIC22.89■■□□□ 1.25
FNDC3BQ53EP0 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
FNDC3BQ53EP0 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
FNDC3BQ53EP0 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
FNDC3BQ53EP0 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
FNDC3BQ53EP0 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC22.88■■□□□ 1.25
FNDC3BQ53EP0 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
FNDC3BQ53EP0 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.88■■□□□ 1.25
FNDC3BQ53EP0 CA15P2-201ENST00000611168 834 ntBASIC22.88■■□□□ 1.25
FNDC3BQ53EP0 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC22.88■■□□□ 1.25
FNDC3BQ53EP0 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
FNDC3BQ53EP0 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
FNDC3BQ53EP0 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
FNDC3BQ53EP0 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
FNDC3BQ53EP0 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
FNDC3BQ53EP0 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
FNDC3BQ53EP0 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC22.87■■□□□ 1.25
FNDC3BQ53EP0 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
FNDC3BQ53EP0 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
FNDC3BQ53EP0 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC22.87■■□□□ 1.25
FNDC3BQ53EP0 STOX2-205ENST00000513034 807 ntTSL 3 BASIC22.87■■□□□ 1.25
FNDC3BQ53EP0 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC22.87■■□□□ 1.25
FNDC3BQ53EP0 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC22.87■■□□□ 1.25
FNDC3BQ53EP0 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
FNDC3BQ53EP0 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
FNDC3BQ53EP0 RASA4CP-201ENST00000424092 1398 ntBASIC22.87■■□□□ 1.25
FNDC3BQ53EP0 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
FNDC3BQ53EP0 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
FNDC3BQ53EP0 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
FNDC3BQ53EP0 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
FNDC3BQ53EP0 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
FNDC3BQ53EP0 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
FNDC3BQ53EP0 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
FNDC3BQ53EP0 AC099791.1-201ENST00000416440 715 ntBASIC22.86■■□□□ 1.25
FNDC3BQ53EP0 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
FNDC3BQ53EP0 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC22.86■■□□□ 1.25
FNDC3BQ53EP0 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
FNDC3BQ53EP0 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
FNDC3BQ53EP0 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
FNDC3BQ53EP0 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC22.86■■□□□ 1.25
FNDC3BQ53EP0 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC22.85■■□□□ 1.25
FNDC3BQ53EP0 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.85■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms