Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CHRFAM7AQ494W8 AL356740.2-201ENST00000601559 647 ntBASIC19.61■□□□□ 0.73
CHRFAM7AQ494W8 AC010997.5-201ENST00000609182 354 ntBASIC19.61■□□□□ 0.73
CHRFAM7AQ494W8 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CHRFAM7AQ494W8 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.61■□□□□ 0.73
CHRFAM7AQ494W8 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHRFAM7AQ494W8 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRFAM7AQ494W8 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CHRFAM7AQ494W8 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRFAM7AQ494W8 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRFAM7AQ494W8 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.6■□□□□ 0.73
CHRFAM7AQ494W8 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRFAM7AQ494W8 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRFAM7AQ494W8 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRFAM7AQ494W8 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRFAM7AQ494W8 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CHRFAM7AQ494W8 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHRFAM7AQ494W8 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHRFAM7AQ494W8 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.59■□□□□ 0.73
CHRFAM7AQ494W8 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.59■□□□□ 0.73
CHRFAM7AQ494W8 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CHRFAM7AQ494W8 MIR3621-201ENST00000580529 85 ntBASIC19.59■□□□□ 0.73
CHRFAM7AQ494W8 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.59■□□□□ 0.73
CHRFAM7AQ494W8 MTDHP2-201ENST00000601468 714 ntBASIC19.59■□□□□ 0.73
CHRFAM7AQ494W8 AC092666.2-201ENST00000613287 246 ntBASIC19.59■□□□□ 0.73
CHRFAM7AQ494W8 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CHRFAM7AQ494W8 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHRFAM7AQ494W8 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHRFAM7AQ494W8 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHRFAM7AQ494W8 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CHRFAM7AQ494W8 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
CHRFAM7AQ494W8 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CHRFAM7AQ494W8 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CHRFAM7AQ494W8 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.58■□□□□ 0.73
CHRFAM7AQ494W8 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.58■□□□□ 0.72
CHRFAM7AQ494W8 AC133561.4-201ENST00000566112 224 ntBASIC19.58■□□□□ 0.72
CHRFAM7AQ494W8 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.58■□□□□ 0.72
CHRFAM7AQ494W8 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.58■□□□□ 0.72
CHRFAM7AQ494W8 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHRFAM7AQ494W8 MIR6724-1-201ENST00000616420 92 ntBASIC19.58■□□□□ 0.72
CHRFAM7AQ494W8 MIR6724-2-201ENST00000616483 92 ntBASIC19.58■□□□□ 0.72
CHRFAM7AQ494W8 MIR6724-4-201ENST00000617390 92 ntBASIC19.58■□□□□ 0.72
CHRFAM7AQ494W8 MIR6724-3-201ENST00000622482 92 ntBASIC19.58■□□□□ 0.72
CHRFAM7AQ494W8 AC079834.2-201ENST00000609776 1949 ntBASIC19.58■□□□□ 0.72
CHRFAM7AQ494W8 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CHRFAM7AQ494W8 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHRFAM7AQ494W8 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHRFAM7AQ494W8 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHRFAM7AQ494W8 HLA-L-211ENST00000482052 1765 ntBASIC19.57■□□□□ 0.72
CHRFAM7AQ494W8 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CHRFAM7AQ494W8 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CHRFAM7AQ494W8 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHRFAM7AQ494W8 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.57■□□□□ 0.72
CHRFAM7AQ494W8 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHRFAM7AQ494W8 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CHRFAM7AQ494W8 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHRFAM7AQ494W8 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.57■□□□□ 0.72
CHRFAM7AQ494W8 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHRFAM7AQ494W8 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CHRFAM7AQ494W8 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CHRFAM7AQ494W8 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CHRFAM7AQ494W8 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHRFAM7AQ494W8 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHRFAM7AQ494W8 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CHRFAM7AQ494W8 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHRFAM7AQ494W8 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.56■□□□□ 0.72
CHRFAM7AQ494W8 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHRFAM7AQ494W8 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.56■□□□□ 0.72
CHRFAM7AQ494W8 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHRFAM7AQ494W8 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CHRFAM7AQ494W8 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CHRFAM7AQ494W8 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CHRFAM7AQ494W8 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHRFAM7AQ494W8 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.56■□□□□ 0.72
CHRFAM7AQ494W8 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHRFAM7AQ494W8 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.55■□□□□ 0.72
CHRFAM7AQ494W8 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHRFAM7AQ494W8 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CHRFAM7AQ494W8 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CHRFAM7AQ494W8 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CHRFAM7AQ494W8 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CHRFAM7AQ494W8 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.54■□□□□ 0.72
CHRFAM7AQ494W8 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CHRFAM7AQ494W8 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CHRFAM7AQ494W8 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.54■□□□□ 0.72
CHRFAM7AQ494W8 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHRFAM7AQ494W8 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CHRFAM7AQ494W8 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.54■□□□□ 0.72
CHRFAM7AQ494W8 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CHRFAM7AQ494W8 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CHRFAM7AQ494W8 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.54■□□□□ 0.72
CHRFAM7AQ494W8 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHRFAM7AQ494W8 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHRFAM7AQ494W8 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHRFAM7AQ494W8 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.53■□□□□ 0.72
CHRFAM7AQ494W8 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHRFAM7AQ494W8 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHRFAM7AQ494W8 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CHRFAM7AQ494W8 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.53■□□□□ 0.72
CHRFAM7AQ494W8 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms