Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CX3CL1P78423 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CX3CL1P78423 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CX3CL1P78423 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CX3CL1P78423 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CX3CL1P78423 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.1■□□□□ 0.49
CX3CL1P78423 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CX3CL1P78423 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CX3CL1P78423 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CX3CL1P78423 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CX3CL1P78423 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.1■□□□□ 0.49
CX3CL1P78423 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CX3CL1P78423 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.1■□□□□ 0.49
CX3CL1P78423 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CX3CL1P78423 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CX3CL1P78423 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.1■□□□□ 0.49
CX3CL1P78423 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CX3CL1P78423 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CX3CL1P78423 DUSP8P5-201ENST00000422884 1815 ntBASIC18.09■□□□□ 0.49
CX3CL1P78423 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.09■□□□□ 0.49
CX3CL1P78423 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CX3CL1P78423 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.09■□□□□ 0.49
CX3CL1P78423 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CX3CL1P78423 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CX3CL1P78423 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CX3CL1P78423 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CX3CL1P78423 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CX3CL1P78423 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CX3CL1P78423 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CX3CL1P78423 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.09■□□□□ 0.49
CX3CL1P78423 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CX3CL1P78423 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CX3CL1P78423 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CX3CL1P78423 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.09■□□□□ 0.49
CX3CL1P78423 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CX3CL1P78423 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CX3CL1P78423 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CX3CL1P78423 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CX3CL1P78423 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CX3CL1P78423 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CX3CL1P78423 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CX3CL1P78423 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CX3CL1P78423 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CX3CL1P78423 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CX3CL1P78423 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CX3CL1P78423 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.07■□□□□ 0.48
CX3CL1P78423 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CX3CL1P78423 HES6-204ENST00000409182 863 ntTSL 2 BASIC18.07■□□□□ 0.48
CX3CL1P78423 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.07■□□□□ 0.48
CX3CL1P78423 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.07■□□□□ 0.48
CX3CL1P78423 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CX3CL1P78423 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.07■□□□□ 0.48
CX3CL1P78423 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.07■□□□□ 0.48
CX3CL1P78423 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.07■□□□□ 0.48
CX3CL1P78423 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CX3CL1P78423 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CX3CL1P78423 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CX3CL1P78423 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CX3CL1P78423 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CX3CL1P78423 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CX3CL1P78423 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
CX3CL1P78423 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CX3CL1P78423 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CX3CL1P78423 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.06■□□□□ 0.48
CX3CL1P78423 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CX3CL1P78423 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CX3CL1P78423 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.06■□□□□ 0.48
CX3CL1P78423 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
CX3CL1P78423 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
CX3CL1P78423 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.06■□□□□ 0.48
CX3CL1P78423 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CX3CL1P78423 MIR6722-201ENST00000617286 78 ntBASIC18.06■□□□□ 0.48
CX3CL1P78423 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.06■□□□□ 0.48
CX3CL1P78423 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CX3CL1P78423 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CX3CL1P78423 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CX3CL1P78423 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.05■□□□□ 0.48
CX3CL1P78423 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.05■□□□□ 0.48
CX3CL1P78423 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CX3CL1P78423 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CX3CL1P78423 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.05■□□□□ 0.48
CX3CL1P78423 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.05■□□□□ 0.48
CX3CL1P78423 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.05■□□□□ 0.48
CX3CL1P78423 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CX3CL1P78423 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.05■□□□□ 0.48
CX3CL1P78423 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CX3CL1P78423 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
CX3CL1P78423 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CX3CL1P78423 TSPY9P-201ENST00000440215 945 ntBASIC18.05■□□□□ 0.48
CX3CL1P78423 TSPY11P-201ENST00000442607 1045 ntBASIC18.05■□□□□ 0.48
CX3CL1P78423 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CX3CL1P78423 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CX3CL1P78423 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
CX3CL1P78423 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CX3CL1P78423 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CX3CL1P78423 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.05■□□□□ 0.48
CX3CL1P78423 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CX3CL1P78423 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CX3CL1P78423 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.04■□□□□ 0.48
CX3CL1P78423 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms