Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.72■□□□□ 0.59
RIPPLY3P57055 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.72■□□□□ 0.59
RIPPLY3P57055 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RIPPLY3P57055 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RIPPLY3P57055 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RIPPLY3P57055 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
RIPPLY3P57055 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.71■□□□□ 0.59
RIPPLY3P57055 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
RIPPLY3P57055 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RIPPLY3P57055 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RIPPLY3P57055 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RIPPLY3P57055 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RIPPLY3P57055 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RIPPLY3P57055 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RIPPLY3P57055 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RIPPLY3P57055 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC18.7■□□□□ 0.58
RIPPLY3P57055 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RIPPLY3P57055 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RIPPLY3P57055 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.7■□□□□ 0.58
RIPPLY3P57055 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.7■□□□□ 0.58
RIPPLY3P57055 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RIPPLY3P57055 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RIPPLY3P57055 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RIPPLY3P57055 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RIPPLY3P57055 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC18.69■□□□□ 0.58
RIPPLY3P57055 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RIPPLY3P57055 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RIPPLY3P57055 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.69■□□□□ 0.58
RIPPLY3P57055 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
RIPPLY3P57055 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
RIPPLY3P57055 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.69■□□□□ 0.58
RIPPLY3P57055 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.69■□□□□ 0.58
RIPPLY3P57055 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.69■□□□□ 0.58
RIPPLY3P57055 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RIPPLY3P57055 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
RIPPLY3P57055 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RIPPLY3P57055 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC18.68■□□□□ 0.58
RIPPLY3P57055 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RIPPLY3P57055 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RIPPLY3P57055 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RIPPLY3P57055 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.68■□□□□ 0.58
RIPPLY3P57055 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RIPPLY3P57055 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.68■□□□□ 0.58
RIPPLY3P57055 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.68■□□□□ 0.58
RIPPLY3P57055 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RIPPLY3P57055 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC18.68■□□□□ 0.58
RIPPLY3P57055 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RIPPLY3P57055 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RIPPLY3P57055 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RIPPLY3P57055 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RIPPLY3P57055 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.67■□□□□ 0.58
RIPPLY3P57055 ECEL1P3-201ENST00000427961 737 ntBASIC18.67■□□□□ 0.58
RIPPLY3P57055 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
RIPPLY3P57055 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RIPPLY3P57055 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RIPPLY3P57055 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.67■□□□□ 0.58
RIPPLY3P57055 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RIPPLY3P57055 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.67■□□□□ 0.58
RIPPLY3P57055 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.67■□□□□ 0.58
RIPPLY3P57055 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.67■□□□□ 0.58
RIPPLY3P57055 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.67■□□□□ 0.58
RIPPLY3P57055 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RIPPLY3P57055 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.67■□□□□ 0.58
RIPPLY3P57055 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RIPPLY3P57055 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RIPPLY3P57055 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RIPPLY3P57055 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RIPPLY3P57055 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
RIPPLY3P57055 SLC29A4P1-201ENST00000398760 971 ntBASIC18.66■□□□□ 0.58
RIPPLY3P57055 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.66■□□□□ 0.58
RIPPLY3P57055 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
RIPPLY3P57055 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.66■□□□□ 0.58
RIPPLY3P57055 AC083906.2-201ENST00000511578 360 ntBASIC18.66■□□□□ 0.58
RIPPLY3P57055 IGHV3-19-201ENST00000521488 291 ntBASIC18.66■□□□□ 0.58
RIPPLY3P57055 AC133041.1-202ENST00000642053 222 ntBASIC18.66■□□□□ 0.58
RIPPLY3P57055 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RIPPLY3P57055 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RIPPLY3P57055 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.65■□□□□ 0.58
RIPPLY3P57055 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.65■□□□□ 0.58
RIPPLY3P57055 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RIPPLY3P57055 AC011767.1-201ENST00000617410 1153 ntBASIC18.65■□□□□ 0.58
RIPPLY3P57055 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RIPPLY3P57055 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
RIPPLY3P57055 SHF-207ENST00000560540 2062 ntTSL 5 BASIC18.65■□□□□ 0.58
RIPPLY3P57055 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
RIPPLY3P57055 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RIPPLY3P57055 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.65■□□□□ 0.58
RIPPLY3P57055 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RIPPLY3P57055 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RIPPLY3P57055 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.65■□□□□ 0.58
RIPPLY3P57055 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
RIPPLY3P57055 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
RIPPLY3P57055 GCSHP5-201ENST00000443090 522 ntBASIC18.64■□□□□ 0.57
RIPPLY3P57055 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.64■□□□□ 0.57
RIPPLY3P57055 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RIPPLY3P57055 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC18.64■□□□□ 0.57
RIPPLY3P57055 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
RIPPLY3P57055 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
RIPPLY3P57055 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC18.63■□□□□ 0.57
RIPPLY3P57055 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms