Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CLDN20P56880 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CLDN20P56880 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.64■□□□□ 0.9
CLDN20P56880 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.64■□□□□ 0.9
CLDN20P56880 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CLDN20P56880 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLDN20P56880 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
CLDN20P56880 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CLDN20P56880 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.64■□□□□ 0.89
CLDN20P56880 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLDN20P56880 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLDN20P56880 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CLDN20P56880 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CLDN20P56880 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLDN20P56880 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLDN20P56880 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLDN20P56880 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLDN20P56880 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLDN20P56880 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.62■□□□□ 0.89
CLDN20P56880 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.62■□□□□ 0.89
CLDN20P56880 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLDN20P56880 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLDN20P56880 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLDN20P56880 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLDN20P56880 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLDN20P56880 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLDN20P56880 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLDN20P56880 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.61■□□□□ 0.89
CLDN20P56880 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLDN20P56880 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLDN20P56880 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.61■□□□□ 0.89
CLDN20P56880 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLDN20P56880 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CLDN20P56880 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLDN20P56880 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.61■□□□□ 0.89
CLDN20P56880 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLDN20P56880 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.61■□□□□ 0.89
CLDN20P56880 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.61■□□□□ 0.89
CLDN20P56880 AL117332.1-201ENST00000622628 974 ntBASIC20.61■□□□□ 0.89
CLDN20P56880 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.61■□□□□ 0.89
CLDN20P56880 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLDN20P56880 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
CLDN20P56880 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN20P56880 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN20P56880 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CLDN20P56880 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.6■□□□□ 0.89
CLDN20P56880 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CLDN20P56880 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.6■□□□□ 0.89
CLDN20P56880 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.6■□□□□ 0.89
CLDN20P56880 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN20P56880 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN20P56880 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CLDN20P56880 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN20P56880 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN20P56880 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CLDN20P56880 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN20P56880 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.59■□□□□ 0.89
CLDN20P56880 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.59■□□□□ 0.89
CLDN20P56880 AL161729.1-201ENST00000604104 1402 ntBASIC20.59■□□□□ 0.89
CLDN20P56880 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN20P56880 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.59■□□□□ 0.89
CLDN20P56880 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.59■□□□□ 0.89
CLDN20P56880 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN20P56880 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.58■□□□□ 0.89
CLDN20P56880 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.58■□□□□ 0.89
CLDN20P56880 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLDN20P56880 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.58■□□□□ 0.89
CLDN20P56880 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLDN20P56880 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLDN20P56880 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.58■□□□□ 0.89
CLDN20P56880 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.58■□□□□ 0.89
CLDN20P56880 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.58■□□□□ 0.89
CLDN20P56880 MIR3621-201ENST00000580529 85 ntBASIC20.58■□□□□ 0.89
CLDN20P56880 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLDN20P56880 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLDN20P56880 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLDN20P56880 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLDN20P56880 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.58■□□□□ 0.88
CLDN20P56880 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN20P56880 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.57■□□□□ 0.88
CLDN20P56880 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN20P56880 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.57■□□□□ 0.88
CLDN20P56880 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.57■□□□□ 0.88
CLDN20P56880 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.57■□□□□ 0.88
CLDN20P56880 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.57■□□□□ 0.88
CLDN20P56880 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.57■□□□□ 0.88
CLDN20P56880 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.56■□□□□ 0.88
CLDN20P56880 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLDN20P56880 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLDN20P56880 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.56■□□□□ 0.88
CLDN20P56880 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.56■□□□□ 0.88
CLDN20P56880 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.56■□□□□ 0.88
CLDN20P56880 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.56■□□□□ 0.88
CLDN20P56880 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.56■□□□□ 0.88
CLDN20P56880 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLDN20P56880 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.56■□□□□ 0.88
CLDN20P56880 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.56■□□□□ 0.88
CLDN20P56880 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLDN20P56880 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLDN20P56880 AC005703.6-201ENST00000623265 1329 ntBASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms